RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 IDI2Q9BXS1 227 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 ZC3H12CQ9C0D7 883 aaKnown RBP15.21■□□□□ 0.02
CTNS-202ENST00000381870 NACA2Q9H009 215 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 KLHL25Q9H0H3 589 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 VPS33BQ9H267 617 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 NMRAL1Q9HBL8 299 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 POU2F3Q9UKI9 436 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 SLC27A5Q9Y2P5 690 aa15.21■□□□□ 0.02
CTNS-202ENST00000381870 SLX4Q8IY92 1834 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TK2O00142 265 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 IL18RAPO95256 599 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 PDGFRAP16234 1089 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 ADSLP30566 484 aaPredicted RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 GNL1P36915 607 aaPredicted RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 GARSP41250 739 aaKnown RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 PSMD8P48556 350 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 SEMA5AQ13591 1074 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 PITRM1Q5JRX3 1037 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 ZNF618Q5T7W0 954 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 LAYNQ6UX15 382 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 MCPH1Q8NEM0 835 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 ACVR1CQ8NER5 493 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TOP1MTQ969P6 601 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 EFHD1Q9BUP0 239 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 EHD1Q9H4M9 534 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 SYBUQ9NX95 663 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TCAF1Q9Y4C2 921 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TANC1Q9C0D5 1861 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 DGAT1O75907 488 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 CLPXO76031 633 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 PGAM1P18669 254 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 GPD1P21695 349 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 TCEA1P23193 301 aaKnown RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 SFNP31947 248 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 OPRL1P41146 370 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 MAGEA12P43365 314 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 NAGLUP54802 743 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 FSTL4Q6MZW2 842 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 ERMP1Q7Z2K6 904 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 CDKL3Q8IVW4 592 aaPredicted RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 DUS3LQ96G46 650 aaKnown RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 MROQ9BYG7 248 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 NDEL1Q9GZM8 345 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 SOX17Q9H6I2 414 aaPredicted RBP15.2■□□□□ 0.02
CTNS-202ENST00000381870 TMX2Q9Y320 296 aa15.2■□□□□ 0.02
CTNS-202ENST00000381870 LRRIQ4A6NIV6 560 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 TPST1O60507 370 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CDH8P55286 799 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 KRT76Q01546 638 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 TRAP1Q12931 704 aaKnown RBP15.19■□□□□ 0.02
CTNS-202ENST00000381870 LRP8Q14114 963 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 SWSAP1Q6NVH7 229 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 STRA8Q7Z7C7 330 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CLEC14AQ86T13 490 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 HMGCLL1Q8TB92 370 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CLEC4DQ8WXI8 215 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 AGAP2Q99490 1192 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 VRTNQ9H8Y1 702 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CACNA2D2Q9NY47 1150 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 UTP6Q9NYH9 597 aaKnown RBP15.19■□□□□ 0.02
CTNS-202ENST00000381870 SCHIP1Q9P0W5 487 aaPredicted RBP15.19■□□□□ 0.02
CTNS-202ENST00000381870 PCDHA10Q9Y5I2 948 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 PTPRFP10586 1907 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 FER1L6Q2WGJ9 1857 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 K7ERI5 159 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CLOCKO15516 846 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 C2P06681 752 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 ATP6V1B2P21281 511 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 PCYT1AP49585 367 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 GRSF1Q12849 480 aaKnown RBP eCLIP15.19■□□□□ 0.02
CTNS-202ENST00000381870 MTERF2Q49AM1 385 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 GRTP1Q5TC63 336 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 REP15Q6BDI9 236 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 ZBTB33Q86T24 672 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 CAMK1DQ8IU85 385 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 LSMEM2Q8N112 164 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 TMEM130Q8N3G9 435 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 OR13F1Q8NGS4 319 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 FCRL3Q96P31 734 aaPredicted RBP15.19■□□□□ 0.02
CTNS-202ENST00000381870 CSF3RQ99062 836 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 RBBP8Q99708 897 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 SLC39A3Q9BRY0 314 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 UNKQ9C0B0 810 aaKnown RBP15.19■□□□□ 0.02
CTNS-202ENST00000381870 CD300AQ9UGN4 299 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 AURKCQ9UQB9 309 aa15.19■□□□□ 0.02
CTNS-202ENST00000381870 RNF103-CHMP3A0A140T963 221 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 FAM47E-STBD1D6RA91 191 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 TKTP29401 623 aaKnown RBP15.18■□□□□ 0.02
CTNS-202ENST00000381870 HPCAL1P37235 193 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 PRKAA1Q13131 559 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 DGKDQ16760 1214 aa15.18■□□□□ 0.02
CTNS-202ENST00000381870 ZNF699Q32M78 642 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms