RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 TTC7BQ86TV6 843 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 FAM35AQ86V20 835 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SYT12Q8IV01 421 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ZFPM1Q8IX07 1006 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KYQ8NBH2 561 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PRICKLE1Q96MT3 831 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PGLYRP2Q96PD5 576 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 NIFKQ9BYG3 293 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ASB8Q9H765 288 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 C10orf88Q9H8K7 445 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MARCOQ9UEW3 520 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 LTBP3Q9NS15 1303 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TLR5O60602 858 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SEC22BO75396 215 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 NOS3P29474 1203 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CD52P31358 61 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 HSD17B3P37058 310 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 VHLP40337 213 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 MRPS5P82675 430 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TMED1Q13445 227 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 POU6F1Q14863 301 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 TCEAL5Q5H9L2 206 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PIGZQ86VD9 579 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 EID3Q8N140 333 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 EMC1Q8N766 993 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 DLG3Q92796 817 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SEC16BQ96JE7 1060 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 KCTD14Q9BQ13 255 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PACSIN1Q9BY11 444 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PCBD2Q9H0N5 130 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CROTQ9UKG9 612 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 E5RJQ4 531 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SKAP2O75563 359 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 OTCP00480 354 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 NFICP08651 508 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PSMC3P17980 439 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SERPINB5P36952 375 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 UBE3AQ05086 875 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SRSF11Q05519 484 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 CAPSQ13938 189 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 AP5B1Q2VPB7 878 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 WDR59Q6PJI9 974 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 DENND1AQ8TEH3 1009 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 ACDQ96AP0 544 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 SYT17Q9BSW7 474 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 USE1Q9NZ43 259 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 AGO1Q9UL18 857 aaKnown RBP7.26□□□□□ -1.25
CCDC171-201ENST00000380701 PHTF1Q9UMS5 762 aa7.26□□□□□ -1.25
CCDC171-201ENST00000380701 A0A096LPK6 155 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CENPXA8MT69 81 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GSTM1P09488 218 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 LBPP18428 481 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 KDELR1P24390 212 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 RFX3P48380 749 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ALDH9A1P49189 494 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 MRPS22P82650 360 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ZACNQ401N2 412 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GPR158Q5T848 1215 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TMEM26Q6ZUK4 368 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 RPAINQ86UA6 219 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FAM126BQ8IXS8 530 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GJD3Q8N144 294 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TTC29Q8NA56 475 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 OR52L1Q8NGH7 329 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 EXO5Q9H790 373 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PRKAG3Q9UGI9 489 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 HMGXB4Q9UGU5 601 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 BTN3A1O00481 513 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ENDOD1O94919 500 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ABHD2P08910 425 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 VAV1P15498 845 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 AMPD1P23109 780 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ATP5F1P24539 256 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FASP25445 335 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TPP2P29144 1249 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 HSD17B2P37059 387 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CCL23P55773 120 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 MRPS25P82663 173 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ILF3Q12906 894 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 HYIQ5T013 277 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FAXCQ5TGI0 409 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FAM92BQ6ZTR7 304 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PIWIL4Q7Z3Z4 852 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 ADGRA1Q86SQ6 560 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GSPT2Q8IYD1 628 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 STK32AQ8WU08 396 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TATDN2Q93075 761 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CELF6Q96J87 481 aaKnown RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 TMEM175Q9BSA9 504 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 POLR1BQ9H9Y6 1135 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 KLC4Q9NSK0 619 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 FNIP2Q9P278 1114 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 PNMA8BQ9ULN7 279 aaPredicted RBP7.25□□□□□ -1.25
CCDC171-201ENST00000380701 DNAJC16Q9Y2G8 782 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GRIN2DO15399 1336 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 IRGMA1A4Y4 181 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 CYP1A2P05177 515 aa7.25□□□□□ -1.25
CCDC171-201ENST00000380701 GJB1P08034 283 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms