RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 BHLHE22Q8NFJ8 381 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 FAM45AQ8TCE6 357 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 SERHL2Q9H4I8 314 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 SERHLQ9NQF3 203 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 hCG_1818297A0A087WSY0 165 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 NFKB1P19838 968 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 FEN1P39748 380 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 SCNN1GP51170 649 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 HK2P52789 917 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 NAA20P61599 178 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 CRADDP78560 199 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 C16orf72Q14CZ0 275 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 TSNQ15631 228 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 PAGE2BQ5JRK9 111 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 DGKKQ5KSL6 1271 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 PIWIL4Q7Z3Z4 852 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 C2CD2Q9Y426 696 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 CENPXA8MT69 81 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 KPNA3O00505 521 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 ANXA5P08758 320 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 RTP1P59025 263 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 PROX1Q92786 737 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 REEP1Q9H902 201 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 CDH9Q9ULB4 789 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 TDRKHQ9Y2W6 561 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 GSSP48637 474 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 MARSP56192 900 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 IRF8Q02556 426 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 CAPSQ13938 189 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 IL17AQ16552 155 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 PTGR2Q8N8N7 351 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 NACC2Q96BF6 587 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 INPP4AQ96PE3 977 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 ACO2Q99798 780 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 EBNA1BP2Q99848 306 aaKnown RBP16.25■□□□□ 0.19
COL2A1-202ENST00000380518 TBCDQ9BTW9 1192 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 KLQ9UEF7 1012 aa16.25■□□□□ 0.19
COL2A1-202ENST00000380518 ADM5C9JUS6 153 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 PQBP1O60828 265 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 FYNP06241 537 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 MYL12AP19105 171 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 IFNGR2P38484 337 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 IRF2BP2Q7Z5L9 587 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 NET1Q7Z628 596 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SELENOMQ8WWX9 145 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SPG21Q9NZD8 308 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TMEM216Q9P0N5 145 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 MORF4L1Q9UBU8 362 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 DAPK2Q9UIK4 370 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TMCO1Q9UM00 188 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 DEPDC5O75140 1603 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 PIPSLA2A3N6 862 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 FAM47E-STBD1D6RA91 191 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 OPLAHO14841 1288 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 ITGA1P56199 1179 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TRIQKQ629K1 86 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 ZNF605Q86T29 641 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 ZNF276Q8N554 614 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 C6orf62Q9GZU0 229 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SEMA6AQ9H2E6 1030 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 DDX18Q9NVP1 670 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 PRKAG3Q9UGI9 489 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 KPNA4O00629 521 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 CCNB1P14635 433 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 CD86P42081 329 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 DDR1Q08345 913 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 DGUOKQ16854 277 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 NEK10Q6ZWH5 1172 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 QRFPRQ96P65 431 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TBC1D10AQ9BXI6 508 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 EPB41L4BQ9H329 900 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SNUPNO95149 360 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 KCNH1O95259 989 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SNRPB2P08579 225 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 COX7A2P14406 83 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TNNI3P19429 210 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 TRIM25Q14258 630 aaKnown RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SQLEQ14534 574 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SLC41A1Q8IVJ1 513 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 SENP6Q9GZR1 1112 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 ZMYND8Q9ULU4 1186 aaPredicted RBP16.24■□□□□ 0.19
COL2A1-202ENST00000380518 MAPRE3Q9UPY8 281 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 ARHGAP23Q9P227 1491 aa16.24■□□□□ 0.19
COL2A1-202ENST00000380518 XYLBO75191 536 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MYBL2P10244 700 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 TTKP33981 857 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MAPK8P45983 427 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 PDZK1Q5T2W1 519 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 RINLQ6ZS11 566 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 C16orf59Q7L2K0 433 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 MAGEC3Q8TD91 643 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 SMIM22K7EJ46 135 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 HDAC3O15379 428 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 ST13P50502 369 aaKnown RBP16.23■□□□□ 0.19
COL2A1-202ENST00000380518 SLC25A3Q00325 362 aa16.23■□□□□ 0.19
COL2A1-202ENST00000380518 SETMARQ53H47 684 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms