RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 NOP53Q9NZM5 478 aaKnown RBP7.9□□□□□ -1.14
CDKL5-202ENST00000379996 SIRPGQ9P1W8 387 aa7.9□□□□□ -1.14
CDKL5-202ENST00000379996 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.9□□□□□ -1.14
CDKL5-202ENST00000379996 HIDE1A8MVS5 230 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.15
CDKL5-202ENST00000379996 FYNP06241 537 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 GPD1P21695 349 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 CA4P22748 312 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 DDX6P26196 483 aaKnown RBP eCLIP7.9□□□□□ -1.15
CDKL5-202ENST00000379996 CSRP3P50461 194 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 SCAPQ12770 1279 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 TUBB3Q13509 450 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 KBTBD12Q3ZCT8 623 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 ANKRD20A2Q5SQ80 823 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 ANKRD20A1Q5TYW2 823 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 ANKRD20A3Q5VUR7 823 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 STEAP4Q687X5 459 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 THSD4Q6ZMP0 1018 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 ATAD1Q8NBU5 361 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 PCDH19Q8TAB3 1148 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 ULBP1Q9BZM6 244 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 VPS37BQ9H9H4 285 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 PCDH10Q9P2E7 1040 aa7.9□□□□□ -1.15
CDKL5-202ENST00000379996 EPOPA6NHQ4 379 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 FAM159BA6NKW6 160 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 MDM4O15151 490 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 EZRP15311 586 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 CALB2P22676 271 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 YWHAQP27348 245 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 PTPN4P29074 926 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 EPHB2P29323 1055 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 ZNF135P52742 658 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 EPHB3P54753 998 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 EIF3EP60228 445 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 RELBQ01201 579 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 OCRLQ01968 901 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 DUSP4Q13115 394 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 OTUD1Q5VV17 481 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 RFWD3Q6PCD5 774 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 CYS1Q717R9 158 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 SCD5Q86SK9 330 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 EFHBQ8N7U6 833 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 MCUQ8NE86 351 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 ARMC2Q8NEN0 867 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 PYROXD1Q8WU10 500 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 NTAN1Q96AB6 310 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 OLFM3Q96PB7 478 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 TBCBQ99426 244 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 PRR14Q9BWN1 585 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 C20orf27Q9GZN8 174 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 NSUN3Q9H649 340 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 RETREG1Q9H6L5 497 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 SYNCQ9H7C4 482 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 ARL8BQ9NVJ2 186 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 AVILO75366 819 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 SPAG6O75602 509 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 ALDH1A2O94788 518 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 IGLV3-27P01718 113 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 LTFP02788 710 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 RPL17P18621 184 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 TGM2P21980 687 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 STIP1P31948 543 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 ALDH1A3P47895 512 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 YWHAGP61981 247 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 NRG1Q02297 640 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 SLC10A2Q12908 348 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 VEPH1Q14D04 833 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 CA9Q16790 459 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 FAM102AQ5T9C2 384 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 KREMEN2Q8NCW0 462 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 OR6Y1Q8NGX8 325 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 LRRC8CQ8TDW0 803 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 NRG4Q8WWG1 115 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 CASP10Q92851 521 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 AZIN2Q96A70 460 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 SIGLEC10Q96LC7 697 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 RAB3IPQ96QF0 476 aaPredicted RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 MCMBPQ9BTE3 642 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 PCDH18Q9HCL0 1135 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 TLR8Q9NR97 1041 aaKnown RBP7.89□□□□□ -1.15
CDKL5-202ENST00000379996 DONSONQ9NYP3 566 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 STAP1Q9ULZ2 295 aa7.89□□□□□ -1.15
CDKL5-202ENST00000379996 HNRNPCL1O60812 293 aaKnown RBP7.88□□□□□ -1.15
CDKL5-202ENST00000379996 LATS1O95835 1130 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 F9P00740 461 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 DESP17661 470 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 L1CAMP32004 1257 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 HTR7P34969 479 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 PHBP35232 272 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 CETN2P41208 172 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 KPNA1P52294 538 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-202ENST00000379996 HDAC4P56524 1084 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 DYNLT1P63172 113 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 CDK16Q00536 496 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 C15orf59Q2T9L4 293 aaPredicted RBP7.88□□□□□ -1.15
CDKL5-202ENST00000379996 PABPC1LQ4VXU2 614 aaKnown RBP7.88□□□□□ -1.15
CDKL5-202ENST00000379996 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 OR6B2Q6IFH4 312 aa7.88□□□□□ -1.15
CDKL5-202ENST00000379996 C16orf46Q6P387 395 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms