RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SLC30A9Q6PML9 568 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 PDZD4Q76G19 769 aaPredicted RBP11□□□□□ -0.65
NEDD9-201ENST00000379433 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
NEDD9-201ENST00000379433 KIRREL3Q8IZU9 778 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 TNS4Q8IZW8 715 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 SLC35B4Q969S0 331 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 EXOC2Q96KP1 924 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 RPRD1AQ96P16 312 aaPredicted RBP11□□□□□ -0.65
NEDD9-201ENST00000379433 SPON2Q9BUD6 331 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 PLAC1Q9HBJ0 212 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 RGS18Q9NS28 235 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
NEDD9-201ENST00000379433 LRRC72A6NJI9 287 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 DCLK1O15075 740 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 IL33O95760 270 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 IGHA2P01877 340 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 OR1D2P34982 312 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 GLRBP48167 497 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 DPYSQ14117 519 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 FAM171BQ6P995 826 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 LIMS2Q7Z4I7 341 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 COLGALT2Q8IYK4 626 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SLC44A1Q8WWI5 657 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 MAGEB18Q96M61 343 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 HIPK3Q9H422 1215 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 C20orf96Q9NUD7 363 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 RBM22Q9NW64 420 aaKnown RBP eCLIP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 C5orf60A6NFR6 353 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 PRMT3O60678 531 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 DGKIO75912 1065 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 TARSP26639 723 aaKnown RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SCTRP47872 440 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 ALDH7A1P49419 539 aaKnown RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 CGB2Q6NT52 195 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SIX5Q8N196 739 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 FITM2Q8N6M3 262 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SMYD1Q8NB12 490 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 FSD1LQ9BXM9 530 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SLC39A8Q9C0K1 460 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.99□□□□□ -0.659e-6■■□□□ 13.2
NEDD9-201ENST00000379433 NT5MQ9NPB1 228 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 BFARQ9NZS9 450 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 E7ESA3 106 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 TSPAN3O60637 253 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 RECKO95980 971 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 SNRPAP09012 282 aaKnown RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 CCNB1P14635 433 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 TYK2P29597 1187 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 GARSP41250 739 aaKnown RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 KCNQ1P51787 676 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 TUBA1BP68363 451 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 ALFQ53S48 1182 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 RAPH1Q70E73 1250 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 TUBA1AQ71U36 451 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 NT5C3BQ969T7 300 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 OLFM3Q96PB7 478 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 MANSC1Q9H8J5 431 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 IARS2Q9NSE4 1012 aaKnown RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 ABCC13Q9NSE7 274 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 EURLQ9NYK6 297 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 DSEQ9UL01 958 aa10.99□□□□□ -0.65
NEDD9-201ENST00000379433 ZMYND8Q9ULU4 1186 aaPredicted RBP10.99□□□□□ -0.65
NEDD9-201ENST00000379433 FKTNO75072 461 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 F9P00740 461 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 PRKCGP05129 697 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CD68P34810 354 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 RPL10AP62906 217 aaKnown RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 INAQ16352 499 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 RAB41Q5JT25 222 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 OTOAQ7RTW8 1153 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 NUP93Q8N1F7 819 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 RFWD2Q8NHY2 731 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 DIS3LQ8TF46 1054 aaKnown RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 STON2Q8WXE9 905 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CYP2S1Q96SQ9 504 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 FICDQ9BVA6 458 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 PCDHB5Q9Y5E4 795 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 J3KR12 359 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 M0QZQ0 153 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 TPP1O14773 563 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 IRAK2O43187 625 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 TYROBPO43914 113 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 OPHN1O60890 802 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CBX6O95503 412 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 ACRP10323 421 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 SP100P23497 879 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 SERPINB6P35237 376 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CTBP1Q13363 440 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 ZNF460Q14592 562 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CHI3L2Q15782 390 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 FUT10Q6P4F1 479 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 STRA8Q7Z7C7 330 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 BPHLQ86WA6 291 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 CHSY1Q86X52 802 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 DCP1BQ8IZD4 617 aaKnown RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 SGCDQ92629 289 aa10.98□□□□□ -0.65
NEDD9-201ENST00000379433 OXNAD1Q96HP4 312 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-201ENST00000379433 ZNF419Q96HQ0 510 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms