RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PMPCBO75439 489 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CLDN11O75508 207 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 POLBP06746 335 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 KRT4P19013 534 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CLCN4P51793 760 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 CAMK1Q14012 370 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 KDELC1Q6UW63 502 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 PPP1R2P1Q96PQ5 205 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 FICDQ9BVA6 458 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MAGEH1Q9H213 219 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 TLR9Q9NR96 1032 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 SLC17A6Q9P2U8 582 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 MYLKQ15746 1914 aa17.65■□□□□ 0.42
THUMPD2-201ENST00000378727 FAM47DPA6NHR8 397 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 CCL16O15467 120 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 TYROBPO43914 113 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 MMP2P08253 660 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 GJA1P17302 382 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 SPANXN3Q5MJ09 141 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 Q6ZNB5 142 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 CHST9Q7L1S5 443 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 MAB21L3Q8N8X9 362 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 MRPS31Q92665 395 aaKnown RBP17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 SERAC1Q96JX3 654 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 IL22Q9GZX6 179 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 CCDC134Q9H6E4 229 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 IL1RAPL1Q9NZN1 696 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 MYO7AQ13402 2215 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 MIA3Q5JRA6 1907 aa17.64■□□□□ 0.41
THUMPD2-201ENST00000378727 ZCWPW2A0A1B0GU75 182 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 A0A1B0GVM2 712 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 GMNCA6NCL1 334 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 TCAF2A6NFQ2 919 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 LATS1O95835 1130 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 IRS1P35568 1242 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ETFBP38117 255 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 DSC2Q02487 901 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 LBRQ14739 615 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 STXBP5Q5T5C0 1151 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 TTC39BQ5VTQ0 682 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 RANBP10Q6VN20 620 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SH2D5Q6ZV89 423 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ARRDC2Q8TBH0 407 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 DENND1AQ8TEH3 1009 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 NSMCE1Q8WV22 266 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF669Q96BR6 464 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 KLF6Q99612 283 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 CHRAC1Q9NRG0 131 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM237BA0A1B0GVD1 139 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 A0A1W2PRU2 124 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 TTC24A2A3L6 582 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 HMX2A2RU54 273 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 C5orf67F2Z3F1 127 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 GOLGA8RI6L899 631 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 AP3B1O00203 1094 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 GFRA2O00451 464 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 MUSKO15146 869 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 USP1O94782 785 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SLC18A1P54219 525 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 WDR4P57081 412 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 MPP3Q13368 585 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SMAD1Q15797 465 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ANKRD20A4Q4UJ75 823 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 TMCO4Q5TGY1 634 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 MFSD3Q96ES6 412 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF317Q96PQ6 595 aaPredicted RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 CCT8L2Q96SF2 557 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 DDX50Q9BQ39 737 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 CORO1BQ9BR76 489 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ATXN3LQ9H3M9 355 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SSU72Q9NP77 194 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 HCFC1R1Q9NWW0 138 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SOX13Q9UN79 622 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 SMG5Q9UPR3 1016 aaKnown RBP17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 TBC1D30Q9Y2I9 924 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 RWDD3Q9Y3V2 267 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ACTL7AQ9Y615 435 aa17.63■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GRXCR1A8MXD5 290 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 TRIM49D1C9J1S8 452 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GRM6O15303 877 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ERVK-10P10266 1014 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 MYL4P12829 197 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 GLDCP23378 1020 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 RPA3P35244 121 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CCR2P41597 374 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CD86P42081 329 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 WNT3AP56704 352 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ITKQ08881 620 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ZNF177Q13360 481 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ZSCAN26Q16670 478 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FAM109BQ6ICB4 259 aaPredicted RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CXorf57Q6NSI4 855 aaKnown RBP17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 FOXR1Q6PIV2 292 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 KDELC2Q7Z4H8 507 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 ELMOD1Q8N336 334 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 TADA1Q96BN2 335 aa17.62■□□□□ 0.41
THUMPD2-201ENST00000378727 CERS2Q96G23 380 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms