RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 RP9Q8TA86 221 aaKnown RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 AGR3Q8TD06 166 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 GDPD5Q8WTR4 605 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 SCYL1Q96KG9 808 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 GBP5Q96PP8 586 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 TMEM30AQ9NV96 361 aa18.48■□□□□ 0.55
TDP2-202ENST00000378198 RUVBL2Q9Y230 463 aaKnown RBP18.48■□□□□ 0.55
TDP2-202ENST00000378198 TK2O00142 265 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 MAP3K13O43283 966 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 PIGNO95427 931 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 MYL3P08590 195 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 SBK3P0C264 359 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 UQCRBP14927 111 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 RAG1P15918 1043 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 CCNCP24863 283 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 CYP2C18P33260 490 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 SERPINB5P36952 375 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 CPT1AP50416 773 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 LSM12Q3MHD2 195 aaKnown RBP18.47■□□□□ 0.55
TDP2-202ENST00000378198 LPCAT4Q643R3 524 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 PKN3Q6P5Z2 889 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 CPSF7Q8N684 471 aaKnown RBP18.47■□□□□ 0.55
TDP2-202ENST00000378198 PHC3Q8NDX5 983 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 STYXQ8WUJ0 223 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 OSBPL2Q9H1P3 480 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 CSNK1G1Q9HCP0 422 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 MYLKQ15746 1914 aa18.47■□□□□ 0.55
TDP2-202ENST00000378198 GOLGA8QA0A0J9YX86 632 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 GOLGA8OA6NCC3 632 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 GOLGA8NF8WBI6 632 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 GOLGA8TH3BQL2 631 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 PEX1O43933 1283 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 THP07101 528 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 GNAT1P11488 350 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 MED21Q13503 144 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 SFT2D3Q587I9 215 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 ARL13AQ5H913 290 aaPredicted RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 C9orf131Q5VYM1 1079 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 OLFML2BQ68BL8 750 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 SLC30A9Q6PML9 568 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 OTOP3Q7RTS5 596 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 TMC7Q7Z402 723 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 CTU1Q7Z7A3 348 aaKnown RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 CNTN4Q8IWV2 1026 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 CNTD1Q8N815 330 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 CELF6Q96J87 481 aaKnown RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 TUBGCP5Q96RT8 1024 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 PARK7Q99497 189 aaKnown RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 TBL1YQ9BQ87 522 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 KATNAL1Q9BW62 490 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 WDR55Q9H6Y2 383 aaPredicted RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 CACNG4Q9UBN1 327 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 STK39Q9UEW8 545 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 TIMM13Q9Y5L4 95 aaPredicted RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 PHGDHO43175 533 aaKnown RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 ANXA9O76027 345 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 AHSGP02765 367 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 ZCCHC18P0CG32 403 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 SLC35E2BP0CK96 405 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 TFEBP19484 476 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 SAT1P21673 171 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 PCSK1P29120 753 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 CLCNKBP51801 687 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 ITGA7Q13683 1181 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 LRRC8EQ6NSJ5 796 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 TAC4Q86UU9 113 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 CCDC117Q8IWD4 279 aaPredicted RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 SCML4Q8N228 414 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 EFCAB3Q8N7B9 438 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 KYQ8NBH2 561 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 HIPK4Q8NE63 616 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 RNF34Q969K3 372 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 FCRL5Q96RD9 977 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 DDX50Q9BQ39 737 aaKnown RBP18.46■□□□□ 0.55
TDP2-202ENST00000378198 VPS28Q9UK41 221 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 ACOT9Q9Y305 439 aa18.46■□□□□ 0.55
TDP2-202ENST00000378198 TARM1B6A8C7 271 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 H3BNX3 289 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 GRID2O43424 1007 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 NUDT2P50583 147 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 PPP2R5DQ14738 602 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 LRRC36Q1X8D7 754 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 FOXB2Q5VYV0 432 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 SNX32Q86XE0 403 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 FSTL5Q8N475 847 aaPredicted RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 SPDYE1Q8NFV5 336 aaPredicted RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 USP33Q8TEY7 942 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 PDCD6IPQ8WUM4 868 aaKnown RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 KCTD4Q8WVF5 259 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 PAPOLBQ9NRJ5 636 aaKnown RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 NEMP1O14524 444 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 KIF3CO14782 793 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 AIM2O14862 343 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 RNASEH1O60930 286 aaKnown RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 ZNF865P0CJ78 1059 aaPredicted RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 PIM1P11309 404 aaPredicted RBP18.45■□□□□ 0.54
TDP2-202ENST00000378198 PEX2P28328 305 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 GABRB3P28472 473 aa18.45■□□□□ 0.54
TDP2-202ENST00000378198 PPARGP37231 505 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms