RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 FAAP100Q0VG06 881 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 KIF19Q2TAC6 998 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 C8orf59Q8N0T1 100 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SCAIQ8N9R8 606 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 EMID1Q96A84 441 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FZD8Q9H461 694 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 DPM1O60762 260 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 COX10Q12887 443 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 BIKQ13323 160 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MKRN4PQ13434 485 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NAA30Q147X3 362 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NCF4Q15080 339 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PLD5Q8N7P1 536 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 OR6Y1Q8NGX8 325 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 MED10Q9BTT4 135 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF70Q9UC06 446 aaPredicted RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 SLC13A2Q13183 592 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 HERC6Q8IVU3 1022 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PER2O15055 1255 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 CWF19L1Q69YN2 538 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 C7orf31Q8N865 590 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ARMC1Q9NVT9 282 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 KRT87PA6NCN2 255 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 FOXN1O15353 648 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 TRPA1O75762 1119 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 C4BPAP04003 597 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NOMO3P69849 1222 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 EZH2Q15910 746 aaKnown RBP5.01□□□□□ -1.61
PCDH9-201ENST00000377861 PAGE2Q7Z2X7 111 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF276Q8N554 614 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 NPHS2Q9NP85 383 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 AAASQ9NRG9 546 aa5.01□□□□□ -1.61
PCDH9-201ENST00000377861 COL5A2P05997 1499 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ATP9BO43861 1147 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 HLA-FP30511 346 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CD151P48509 253 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 EPHB1P54762 984 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 FOLH1Q04609 750 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 KDSRQ06136 332 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SPDYE2Q495Y8 402 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 DDX59Q5T1V6 619 aaKnown RBP eCLIP5□□□□□ -1.61
PCDH9-201ENST00000377861 DYNLL2Q96FJ2 89 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PGAP3Q96FM1 320 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 IMPAD1Q9NX62 359 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ST3GAL5Q9UNP4 418 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 hCG_1642624A0A1W2PR95 340 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 AMPD1P23109 780 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PSPHP78330 225 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ELP6Q0PNE2 266 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 C2orf69Q8N8R5 385 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 DCUN1D1Q96GG9 259 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ACO2Q99798 780 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CD248Q9HCU0 757 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CYB5R1Q9UHQ9 305 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 NOCTQ9UK39 431 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 ACPPP15309 386 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MAPK10P53779 464 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PRKD1Q15139 912 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 TSTD2Q5T7W7 516 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PPP1R10Q96QC0 940 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 AGAP1Q9UPQ3 857 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 SULT1C3Q6IMI6 304 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MON1BQ7L1V2 547 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 EEF2KMTQ96G04 330 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PARK7Q99497 189 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 DHX35Q9H5Z1 703 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 TASP1Q9H6P5 420 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 COPZ2Q9P299 210 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 HRH2P25021 359 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TBL3Q12788 808 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 NOMO1Q15155 1222 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TMCO6Q96DC7 493 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 hCG_1818297A0A087WSY0 165 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 CD40LGP29965 261 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PTGER3P43115 390 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TRPC1P48995 793 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF177Q13360 481 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 SLC44A2Q8IWA5 706 aaPredicted RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 NPLOC4Q8TAT6 608 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 S100A14Q9HCY8 104 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 DDX3YO15523 660 aaKnown RBP5□□□□□ -1.61
PCDH9-201ENST00000377861 GRM5P41594 1212 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 CDKN2BP42772 138 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 HUNKP57058 714 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PDK3Q15120 406 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 DACT2Q5SW24 774 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ABHD15Q6UXT9 468 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ATPAF2Q8N5M1 289 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 GRHL1Q9NZI5 618 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TCRBV9S1A1TA0A576 114 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 STAG3L1P0CL83 205 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM192Q8IY95 271 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 OR52E4Q8NGH9 312 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 GNPTGQ9UJJ9 305 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 MAP3K7CLP57077 242 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 RIOX2Q8IUF8 465 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 PLD3Q8IV08 490 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 ZZZ3Q8IYH5 903 aa5□□□□□ -1.61
PCDH9-201ENST00000377861 OR6P1Q8NGX9 317 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms