RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 RASA4O43374 803 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ATP6V1G2O95670 118 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 LTFP02788 710 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
VRK3-202ENST00000377011 SSR1P43307 286 aaKnown RBP12.67□□□□□ -0.38
VRK3-202ENST00000377011 PSEN1P49768 467 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 NCALDP61601 193 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 PPARDQ03181 441 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 STILQ15468 1287 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ANO4Q32M45 955 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 SPDYAQ5MJ70 313 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 FAM183BPQ6ZVS7 135 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 CENPUQ71F23 418 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ASCL5Q7RTU5 278 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
VRK3-202ENST00000377011 SCML4Q8N228 414 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ANKRD42Q8N9B4 389 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
VRK3-202ENST00000377011 LHX5Q9H2C1 402 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ABCF3Q9NUQ8 709 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 KLHL14Q9P2G3 628 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
VRK3-202ENST00000377011 FAM186AA6NE01 2351 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 LAMTOR5O43504 91 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 KIF1CO43896 1103 aaKnown RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 TULP3O75386 442 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 ATP5HO75947 161 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 UBOX5O94941 541 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 KRT7P08729 469 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 NQO1P15559 274 aaKnown RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 CDKN2BP42772 138 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 VPS41P49754 854 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 ARSEP51690 589 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 NUBP1P53384 320 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 ZNF252P-AS1Q0IIN9 211 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 MPP2Q14168 576 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 LRRC14Q15048 493 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 TRIP4Q15650 581 aaPredicted RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 TAZQ16635 292 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 RNASEH2BQ5TBB1 312 aaKnown RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 OTUD1Q5VV17 481 aaPredicted RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 TRNP1Q6NT89 227 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 DCUN1D2Q6PH85 259 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 MFSD7Q6UXD7 560 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 SRRM1Q8IYB3 904 aaKnown RBP12.66□□□□□ -0.38
VRK3-202ENST00000377011 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 RPLP0P6Q8NHW5 317 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 SLC35B2Q8TB61 432 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 MGARPQ8TDB4 240 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 SAYSD1Q9NPB0 183 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 WDR35Q9P2L0 1181 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 DNPEPQ9ULA0 475 aa12.66□□□□□ -0.38
VRK3-202ENST00000377011 PTPRZ1P23471 2315 aaPredicted RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 MED7O43513 233 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 TSPAN3O60637 253 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 ASMTLO95671 621 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 NCAM1P13591 858 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 CCNB1P14635 433 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 TYRP14679 529 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 CREB1P16220 341 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 TAC1P20366 129 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 PHBP35232 272 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
VRK3-202ENST00000377011 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 ACAP1Q15027 740 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 LLGL1Q15334 1064 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 C2orf27AQ580R0 203 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 FYB2Q5VWT5 728 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 NADSYN1Q6IA69 706 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 OLFML1Q6UWY5 402 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 CCDC33Q8N5R6 958 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 DENND1AQ8TEH3 1009 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 IRGQQ8WZA9 623 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 NELL1Q92832 810 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 FAM149B1Q96BN6 582 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 FCRL2Q96LA5 508 aaPredicted RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 C9orf72Q96LT7 481 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 MCEEQ96PE7 176 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 ABCC13Q9NSE7 274 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 GFRA2O00451 464 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 SLC9A3R1O14745 358 aaPredicted RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 NCAM2O15394 837 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 KAT7O95251 611 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 IGLV3-27P01718 113 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 CISD3P0C7P0 127 aa12.65□□□□□ -0.38
VRK3-202ENST00000377011 PECAM1P16284 738 aaPredicted RBP12.65□□□□□ -0.38
VRK3-202ENST00000377011 SLC6A4P31645 630 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms