RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 UMODL1-AS1Q8N2C9 162 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 HMCESQ96FZ2 354 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 GPBP1L1Q9HC44 474 aaPredicted RBP22.03■■□□□ 1.12
RNF39-202ENST00000376751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.03■■□□□ 1.12
RNF39-202ENST00000376751 SLC2A6Q9UGQ3 507 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 DNAJC16Q9Y2G8 782 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 PCDHB7Q9Y5E2 793 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 SERPINE1P05121 402 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 SLC2A3P11169 496 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 CPB1P15086 417 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 DNAJB2P25686 324 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 ARNTP27540 789 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 GABRB3P28472 473 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 CSRP3P50461 194 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 PGGT1BP53609 377 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 GRM3Q14832 879 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 KRT72Q14CN4 511 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 RTP2Q5QGT7 225 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 RNF19BQ6ZMZ0 732 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 ZC3HC1Q86WB0 502 aaKnown RBP22.03■■□□□ 1.12
RNF39-202ENST00000376751 TMEM173Q86WV6 379 aaPredicted RBP22.03■■□□□ 1.12
RNF39-202ENST00000376751 MIB1Q86YT6 1006 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 TNS4Q8IZW8 715 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 FAM13CQ8NE31 585 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 NSL1Q96IY1 281 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 SORT1Q99523 831 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 EBF4Q9BQW3 602 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 ATXN3LQ9H3M9 355 aa22.03■■□□□ 1.12
RNF39-202ENST00000376751 NT5C1B-RDH14C9J2C7 533 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 J3KR12 359 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 TIMM44O43615 452 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 MPOP05164 745 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 C2P06681 752 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 HAPLN1P10915 354 aaPredicted RBP22.02■■□□□ 1.12
RNF39-202ENST00000376751 RHOQP17081 205 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 RASSF2P50749 326 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 TAF10Q12962 218 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 E2F5Q15329 346 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 TRIP4Q15650 581 aaPredicted RBP22.02■■□□□ 1.12
RNF39-202ENST00000376751 DEFB115Q30KQ5 88 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 ESRP1Q6NXG1 681 aaKnown RBP22.02■■□□□ 1.12
RNF39-202ENST00000376751 FUT10Q6P4F1 479 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 KDELC1Q6UW63 502 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 KDELC2Q7Z4H8 507 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 TREML1Q86YW5 311 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 BCL7CQ8WUZ0 217 aaPredicted RBP22.02■■□□□ 1.12
RNF39-202ENST00000376751 IGSF8Q969P0 613 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 GPR22Q99680 433 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 SEPT5Q99719 369 aaPredicted RBP22.02■■□□□ 1.12
RNF39-202ENST00000376751 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.02■■□□□ 1.12
RNF39-202ENST00000376751 WWP1Q9H0M0 922 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 TCAF1Q9Y4C2 921 aa22.02■■□□□ 1.12
RNF39-202ENST00000376751 HMBSP08397 361 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CDK7P50613 346 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 RAP1GAP2Q684P5 730 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 FAM126BQ8IXS8 530 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 ZYG11BQ9C0D3 744 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 TMEM248Q9NWD8 314 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CLIC5Q9NZA1 410 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 FNIP2Q9P278 1114 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 PPARGC1AQ9UBK2 798 aaKnown RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 SLC39A10Q9ULF5 831 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 IGLV3-10A0A075B6K4 115 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 TBC1D4O60343 1298 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 HNRNPCL1O60812 293 aaKnown RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 CPA3P15088 417 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 ARCN1P48444 511 aaKnown RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 MGAT5BQ3V5L5 792 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CCDC153Q494R4 210 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 C10orf120Q5SQS8 335 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 FBXL22Q6P050 247 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 RANBP10Q6VN20 620 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 TAS1R1Q7RTX1 841 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 MAVSQ7Z434 540 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CIR1Q86X95 450 aaPredicted RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 LRRC49Q8IUZ0 686 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 PPHLN1Q8NEY8 458 aaKnown RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 OR6Y1Q8NGX8 325 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 MYEOVQ96EZ4 313 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 KLHL5Q96PQ7 755 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CADM1Q9BY67 442 aaKnown RBP22.01■■□□□ 1.11
RNF39-202ENST00000376751 MARCH2Q9P0N8 246 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 ZNF212Q9UDV6 495 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 L3MBTL1Q9Y468 752 aa22.01■■□□□ 1.11
RNF39-202ENST00000376751 CAPN14A8MX76 684 aa22■■□□□ 1.11
RNF39-202ENST00000376751 G3V2L1 256 aa22■■□□□ 1.11
RNF39-202ENST00000376751 SLC8A1P32418 973 aa22■■□□□ 1.11
RNF39-202ENST00000376751 NDST2P52849 883 aa22■■□□□ 1.11
RNF39-202ENST00000376751 WNT3AP56704 352 aa22■■□□□ 1.11
RNF39-202ENST00000376751 MPP1Q00013 466 aa22■■□□□ 1.11
RNF39-202ENST00000376751 ITGA9Q13797 1035 aa22■■□□□ 1.11
RNF39-202ENST00000376751 IHHQ14623 411 aa22■■□□□ 1.11
RNF39-202ENST00000376751 PCSK7Q16549 785 aa22■■□□□ 1.11
RNF39-202ENST00000376751 RINLQ6ZS11 566 aa22■■□□□ 1.11
RNF39-202ENST00000376751 DENND6AQ8IWF6 608 aa22■■□□□ 1.11
RNF39-202ENST00000376751 CNTN4Q8IWV2 1026 aa22■■□□□ 1.11
RNF39-202ENST00000376751 FSD1LQ9BXM9 530 aa22■■□□□ 1.11
RNF39-202ENST00000376751 RHOJQ9H4E5 214 aa22■■□□□ 1.11
RNF39-202ENST00000376751 NT5MQ9NPB1 228 aa22■■□□□ 1.11
RNF39-202ENST00000376751 ENTPD7Q9NQZ7 604 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms