RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 PIGGQ5H8A4 983 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 MAP3K21Q5TCX8 1036 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 NAPEPLDQ6IQ20 393 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 DCLRE1AQ6PJP8 1040 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 LINC00523Q86TU6 105 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 FAM35AQ86V20 835 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 CENPLQ8N0S6 344 aaPredicted RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 TMEM86AQ8N2M4 240 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 ARHGAP18Q8N392 663 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 NPLOC4Q8TAT6 608 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PDCD6IPQ8WUM4 868 aaKnown RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 SHCBP1LQ9BZQ2 653 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 C6orf203Q9P0P8 240 aaPredicted RBP10.85□□□□□ -0.67
ABCF1-202ENST00000376545 PTCH2Q9Y6C5 1203 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 NUP205Q92621 2012 aa10.85□□□□□ -0.67
ABCF1-202ENST00000376545 IGLV3-25P01717 112 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 RAG1P15918 1043 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 VCLP18206 1134 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TFEBP19484 476 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MPSTP25325 297 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 LHX1P48742 406 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MFSD10Q14728 455 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TICAM1Q8IUC6 712 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PCED1BQ96HM7 432 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MAELQ96JY0 434 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SH3GL3Q99963 347 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 CYP4F11Q9HBI6 524 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PSMD13Q9UNM6 376 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 NLRC5Q86WI3 1866 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 NYNRINQ9P2P1 1898 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TK2O00142 265 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DENRO43583 198 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ATP9BO43861 1147 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ZMPSTE24O75844 475 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 LRIG2O94898 1065 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 AHSGP02765 367 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 YBX3P16989 372 aaKnown RBP eCLIP10.84□□□□□ -0.672e-8■□□□□ 10.6
ABCF1-202ENST00000376545 GRIA4P48058 902 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ARCN1P48444 511 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 CLCN2P51788 898 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PRKAA1Q13131 559 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SLC12A1Q13621 1099 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 RFTN1Q14699 578 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 CFAP157Q5JU67 520 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TCHHL1Q5QJ38 904 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SEL1L3Q68CR1 1132 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 C16orf89Q6UX73 402 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SETD3Q86TU7 594 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 OSBPL2Q9H1P3 480 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MRM3Q9HC36 420 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 OR12D3Q9UGF7 316 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ZDHHC2Q9UIJ5 367 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TRPM7Q96QT4 1865 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TREHO43280 583 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 TADA2AO75478 443 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 AP1G2O75843 785 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DDHD2O94830 711 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ZCCHC18P0CG32 403 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 NCAM1P13591 858 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 CCNCP24863 283 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MED21Q13503 144 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ARL13AQ5H913 290 aaPredicted RBP10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PCID2Q5JVF3 399 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 PKN3Q6P5Z2 889 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 UGT2A3Q6UWM9 527 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 BEND5Q7L4P6 421 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 ANKRD23Q86SG2 305 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DSELQ8IZU8 1212 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 SENP8Q96LD8 212 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 EPAS1Q99814 870 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 DDIT4Q9NX09 232 aa10.84□□□□□ -0.67
ABCF1-202ENST00000376545 MYBPHLA2RUH7 354 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ARNTP27540 789 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 HOXC13P31276 330 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ADRA1AP35348 466 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PPARGP37231 505 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 ABCG1P45844 678 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 DLG1Q12959 904 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 LIN52Q52LA3 116 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 TSTD2Q5T7W7 516 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 AP1ARQ63HQ0 302 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 MFSD6LQ8IWD5 586 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 FSTL5Q8N475 847 aaPredicted RBP10.83□□□□□ -0.68
ABCF1-202ENST00000376545 MARVELD2Q8N4S9 558 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 KYQ8NBH2 561 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 PIP4K2CQ8TBX8 421 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 FCRL5Q96RD9 977 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 IL12RB2Q99665 862 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 APBA2Q99767 749 aa10.83□□□□□ -0.68
ABCF1-202ENST00000376545 SPATA16Q9BXB7 569 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms