RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 J3KR12 359 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 POLBP06746 335 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CA3P07451 260 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MMP2P08253 660 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MDH1P40925 334 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 ILF2Q12905 390 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 FYB2Q5VWT5 728 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 DENND5AQ6IQ26 1287 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 RFWD3Q6PCD5 774 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MARK2Q7KZI7 788 aaKnown RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 TRABD2AQ86V40 505 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 SLC26A11Q86WA9 606 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CMTM8Q8IZV2 173 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 TAB3Q8N5C8 712 aaPredicted RBP11.31□□□□□ -0.6
PDPN-202ENST00000376057 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 OTUB2Q96DC9 234 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 MTBPQ96DY7 904 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 PSKH2Q96QS6 385 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CYP2S1Q96SQ9 504 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CEP41Q9BYV8 373 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 CCDC134Q9H6E4 229 aa11.31□□□□□ -0.6
PDPN-202ENST00000376057 NOTCH4Q99466 2003 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 LOC285095A0A1B0GVY8 99 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 TLDC2A0PJX2 215 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 PRPF4O43172 522 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDPN-202ENST00000376057 LUC7L3O95232 432 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 IRS1P35568 1242 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 MSH2P43246 934 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 SERPINB9P50453 376 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 NSUN2Q08J23 767 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDPN-202ENST00000376057 NIPAL4Q0D2K0 466 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 LAMB3Q13751 1172 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 DUSP6Q16828 381 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 TMEM184AQ6ZMB5 413 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 OTOP3Q7RTS5 596 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 PRPF39Q86UA1 669 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 PEX13Q92968 403 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 ALKBH8Q96BT7 664 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 MRGPRX2Q96LB1 330 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 PAFAH2Q99487 392 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 CORO1BQ9BR76 489 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 CAPS2Q9BXY5 557 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 POLR1EQ9GZS1 481 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 TRPC7Q9HCX4 862 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 SEPT3Q9UH03 358 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 LEFTY2O00292 366 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 CCL16O15467 120 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 ZMPSTE24O75844 475 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 RHOP08100 348 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 RHOCP08134 193 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 MGAT1P26572 445 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 BMP8BP34820 402 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 CA8P35219 290 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 RPS24P62847 133 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 CYP4F8P98187 520 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 SLC10A7Q0GE19 358 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 PCID2Q5JVF3 399 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 LGSNQ5TDP6 509 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 TIFABQ6ZNK6 161 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 LRRC6Q86X45 466 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 MPP5Q8N3R9 675 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 OR52K1Q8NGK4 314 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 UHMK1Q8TAS1 419 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 TMA16Q96EY4 203 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 ALG14Q96F25 216 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 KIF9Q9HAQ2 790 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 DZANK1Q9NVP4 752 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 BCCIPQ9P287 314 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDPN-202ENST00000376057 YBX2Q9Y2T7 364 aaKnown RBP11.3□□□□□ -0.6
PDPN-202ENST00000376057 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
PDPN-202ENST00000376057 IQANK1A0A1B0GTG1 560 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 A0A1W2PRU2 124 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 MYOGP15173 224 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 PSMA3P25788 255 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 ACVRL1P37023 503 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CCR2P41597 374 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 USP4Q13107 963 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CRYMQ14894 314 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CYP4X1Q8N118 509 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CFAP52Q8N1V2 620 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 MAB21L3Q8N8X9 362 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 FIBINQ8TAL6 211 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 MICAL1Q8TDZ2 1067 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 FEM1CQ96JP0 617 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 GDF15Q99988 308 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 SYBUQ9NX95 663 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 MKS1Q9NXB0 559 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 SAMD15Q9P1V8 674 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 TBC1D14Q9P2M4 693 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
PDPN-202ENST00000376057 SIN3BO75182 1162 aa11.29□□□□□ -0.6
PDPN-202ENST00000376057 MYL4P12829 197 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms