RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ATICP31939 592 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 PPARGP37231 505 aaPredicted RBP11.28□□□□□ -0.6
CCDC40-203ENST00000374877 DPP6P42658 865 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 GLRBP48167 497 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 PGGT1BP53609 377 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 APOFQ13790 326 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 TICAM1Q8IUC6 712 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 PGAM4Q8N0Y7 254 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 NPAS2Q99743 824 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 C20orf96Q9NUD7 363 aaPredicted RBP11.28□□□□□ -0.6
CCDC40-203ENST00000374877 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
CCDC40-203ENST00000374877 MATN2O00339 956 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 SEPT4O43236 478 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.6
CCDC40-203ENST00000374877 IQCF3P0C7M6 154 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 CCDC166P0CW27 439 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 LCP1P13796 627 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 PTPN1P18031 435 aaKnown RBP11.27□□□□□ -0.6
CCDC40-203ENST00000374877 CDH2P19022 906 aaPredicted RBP11.27□□□□□ -0.6
CCDC40-203ENST00000374877 RPL14P50914 215 aaKnown RBP11.27□□□□□ -0.6
CCDC40-203ENST00000374877 LIMK2P53671 638 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 GRIK4Q16099 956 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 PID1Q7Z2X4 250 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 DNAAF3Q8N9W5 541 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 TSPAN14Q8NG11 270 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 URGCPQ8TCY9 931 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 ATP6V1E2Q96A05 226 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 CPB2Q96IY4 423 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 SCYL1Q96KG9 808 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 LPIN3Q9BQK8 851 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 TASP1Q9H6P5 420 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 CAAP1Q9H8G2 361 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 CIDEBQ9UHD4 219 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 HEMK1Q9Y5R4 338 aaPredicted RBP11.27□□□□□ -0.6
CCDC40-203ENST00000374877 SNX9Q9Y5X1 595 aa11.27□□□□□ -0.6
CCDC40-203ENST00000374877 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 KCNK1O00180 336 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 MAGEB3O15480 346 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 ARL13AQ5H913 290 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 EFCAB12Q6NXP0 572 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 MIPOL1Q8TD10 442 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 PXYLP1Q8TE99 480 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 DLG3Q92796 817 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 EFCAB1Q9HAE3 211 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CDYLQ9Y232 598 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 TNFSF13BQ9Y275 285 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 GMEB1Q9Y692 573 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 ZSWIM8A7E2V4 1837 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 PRSS51A0A1B0GVH4 220 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CCDC78A2IDD5 438 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 PHKA2P46019 1235 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 GRIA4P48058 902 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 NAGLUP54802 743 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 IGBP1P78318 339 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 INCA1Q0VD86 236 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 PTK2BQ14289 1009 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 FSCN1Q16658 493 aaKnown RBP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 SPANXN3Q5MJ09 141 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 IL23RQ5VWK5 629 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM126BQ8IUX1 230 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CXorf38Q8TB03 319 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 TMIGD2Q96BF3 282 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CNDP1Q96KN2 507 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 ACE2Q9BYF1 805 aaPredicted RBP11.27□□□□□ -0.61
CCDC40-203ENST00000374877 SLC39A10Q9ULF5 831 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 RAP2CQ9Y3L5 183 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 NRCAMQ92823 1304 aa11.27□□□□□ -0.61
CCDC40-203ENST00000374877 ARHGEF37A1IGU5 675 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 FKTNO75072 461 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 GABBR2O75899 941 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 BCAS2O75934 225 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 VAPBO95292 243 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 JUNP05412 331 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TFEBP19484 476 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 NUMBP49757 651 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 PSEN2P49810 448 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MBTD1Q05BQ5 628 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MFSD10Q14728 455 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 KRT80Q6KB66 452 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 SETD3Q86TU7 594 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 LZICQ8WZA0 190 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF512Q96ME7 567 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 HAUS8Q9BT25 410 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 DPP3Q9NY33 737 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 KLHL8Q9P2G9 620 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 EPS15L1Q9UBC2 864 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 RSL24D1Q9UHA3 163 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 KIAA1257Q9ULG3 409 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 FAF1Q9UNN5 650 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 CDC42EP1Q00587 391 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 CAP1Q01518 475 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms