RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 INO80DQ53TQ3 878 aaPredicted RBP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 MARC1Q5VT66 337 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 PPIL6Q8IXY8 311 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 APCDD1Q8J025 514 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 NAT8LQ8N9F0 302 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 FBXO25Q8TCJ0 367 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 WFIKKN2Q8TEU8 576 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 AENQ8WTP8 325 aaKnown RBP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 PRCCQ92733 491 aaPredicted RBP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 NXPE3Q969Y0 559 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 EXOC4Q96A65 974 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 XPO6Q96QU8 1125 aaKnown RBP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 TRMT61BQ9BVS5 477 aaKnown RBP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 GLOD4Q9HC38 313 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 RBM22Q9NW64 420 aaKnown RBP eCLIP17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 SEPT3Q9UH03 358 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 NFU1Q9UMS0 254 aa17.54■□□□□ 0.4
HLA-DMA-201ENST00000374843 OTOL1A6NHN0 477 aaPredicted RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 CBX4O00257 560 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 DYNC1I1O14576 645 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 SNAP91O60641 907 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 CISD3P0C7P0 127 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 NFKB1P19838 968 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 PSMB4P28070 264 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 GDI1P31150 447 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 EIF2DP41214 584 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 CBLBQ13191 982 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 RUNX3Q13761 415 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 SLC14A2Q15849 920 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 PID1Q7Z2X4 250 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 METTL3Q86U44 580 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 C12orf40Q86WS4 652 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 AHI1Q8N157 1196 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 HNRNPLLQ8WVV9 542 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 IFT81Q8WYA0 676 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 ANKRD7Q92527 254 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 AGAP3Q96P47 875 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 PSKH2Q96QS6 385 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 FCRL5Q96RD9 977 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 MGME1Q9BQP7 344 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 RPP25Q9BUL9 199 aaKnown RBP17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 FOXP3Q9BZS1 431 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 PHACTR1Q9C0D0 580 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 ETNK1Q9HBU6 452 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 HAUS2Q9NVX0 235 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 ANAPC5Q9UJX4 755 aa17.53■□□□□ 0.4
HLA-DMA-201ENST00000374843 C5orf42Q9H799 3197 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ERI2A8K979 691 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 TULP3O75386 442 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 TMEM63AO94886 807 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 SERPINH1P50454 418 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 VASPP50552 380 aaPredicted RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 PLTPP55058 493 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 BASP1P80723 227 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 CDK16Q00536 496 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 SULT2A1Q06520 285 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 SLC20A2Q08357 652 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 NR1H3Q13133 447 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 HLTFQ14527 1009 aaKnown RBP eCLIP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ZNF235Q14590 738 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ANKRD22Q5VYY1 191 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ADIPOR2Q86V24 386 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 PLCD3Q8N3E9 789 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 BBS5Q8N3I7 341 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 PHTF2Q8N3S3 785 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 PGBD5Q8N414 524 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ZCCHC9Q8N567 271 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 ST13P5Q8NFI4 369 aaPredicted RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 USP33Q8TEY7 942 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 TTC17Q96AE7 1141 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 TADA1Q96BN2 335 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 FMO2Q99518 471 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 SLC25A51Q9H1U9 297 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 TRPV5Q9NQA5 729 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 DNAJC17Q9NVM6 304 aaKnown RBP17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 HS3ST2Q9Y278 367 aa17.52■□□□□ 0.4
HLA-DMA-201ENST00000374843 EYSQ5T1H1 3165 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 ERLIN1O75477 346 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 TMCC1O94876 653 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 SUN1O94901 812 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 DGKGP49619 791 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 ITPRIPL2Q3MIP1 535 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 FAXCQ5TGI0 409 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 KCTD11Q693B1 232 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 FBXO38Q6PIJ6 1188 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 MCUQ8NE86 351 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 CHFRQ96EP1 664 aa17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 IMP4Q96G21 291 aaKnown RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 MLPHQ9BV36 600 aaPredicted RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 CINPQ9BW66 212 aaPredicted RBP17.51■□□□□ 0.39
HLA-DMA-201ENST00000374843 FRMD8Q9BZ67 464 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms