RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SP110Q9HB58 689 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 POLR3BQ9NW08 1133 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 UBA2Q9UBT2 640 aaPredicted RBP11.58□□□□□ -0.56
HSPG2-202ENST00000374676 EBF1Q9UH73 591 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 HEY1Q9Y5J3 304 aa11.58□□□□□ -0.56
HSPG2-202ENST00000374676 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 CCDC163A0A0D9SF12 145 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 APOC4-APOC2K7ER74 178 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 MCF2LO15068 1137 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 ALOX15BO15296 676 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 ZBTB24O43167 697 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-202ENST00000374676 SIN3BO75182 1162 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 APBB3O95704 486 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 PEX11BO96011 259 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 APOC2P02655 101 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 DNA2P51530 1060 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 DYNLT1P63172 113 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 PPIDQ08752 370 aaKnown RBP11.57□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF211Q13398 564 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-202ENST00000374676 HNRNPDQ14103 355 aaKnown RBP11.57□□□□□ -0.56
HSPG2-202ENST00000374676 LLGL1Q15334 1064 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 CYTH1Q15438 398 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF528Q3MIS6 628 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 CARD16Q5EG05 197 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 SEL1L2Q5TEA6 688 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 AADACL2Q6P093 401 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 C22orf39Q6P5X5 142 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 RASSF3Q86WH2 238 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 NELL1Q92832 810 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 HDAC11Q96DB2 347 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 CCDC114Q96M63 670 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 FAM129BQ96TA1 746 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 FAM126AQ9BYI3 521 aaPredicted RBP11.57□□□□□ -0.56
HSPG2-202ENST00000374676 MTG2Q9H4K7 406 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 ACTL7AQ9Y615 435 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 SPAG17Q6Q759 2223 aa11.57□□□□□ -0.56
HSPG2-202ENST00000374676 GON4LQ3T8J9 2241 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 EML5Q05BV3 1969 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TCRBV21S2A2A0A5A6 115 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 KCNK3O14649 394 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 PPP1R12AO14974 1030 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 MATN3O15232 486 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TMCC1O94876 653 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 GSRP00390 522 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 PECAM1P16284 738 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 GABRG2P18507 467 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 RECQLP46063 649 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 CSNK1DP48730 415 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 RENBPP51606 427 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 COPAP53621 1224 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 NRLP54845 237 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 GNG11P61952 73 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 SNRPD1P62314 119 aaKnown RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 CSTF1Q05048 431 aaKnown RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 NSUN2Q08J23 767 aaKnown RBP eCLIP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 KLF1Q13351 362 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 XRCC4Q13426 336 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 ELAVL3Q14576 367 aaKnown RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 ANGPT1Q15389 498 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 NPNTQ6UXI9 565 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 LEKR1Q6ZMV7 388 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 Q6ZVU0 165 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 SLC13A5Q86YT5 568 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TMPRSS6Q8IU80 811 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 CCDC13Q8IYE1 715 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TEX26Q8N6G2 289 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TTC13Q8NBP0 860 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 OR2A12Q8NGT7 310 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 MAML1Q92585 1016 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 P3H4Q92791 437 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 TRIM44Q96DX7 344 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 PBKQ96KB5 322 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 HHIPQ96QV1 700 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 RSPH9Q9H1X1 276 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 SEPT3Q9UH03 358 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 AMACRQ9UHK6 382 aa11.56□□□□□ -0.56
HSPG2-202ENST00000374676 FCF1Q9Y324 198 aaKnown RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
HSPG2-202ENST00000374676 SDK1Q7Z5N4 2213 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 PLXND1Q9Y4D7 1925 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 HACD1B0YJ81 288 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ENC1O14682 589 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 RNASEH1O60930 286 aaKnown RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 MAP3K6O95382 1288 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 POP4O95707 220 aaKnown RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 VAV1P15498 845 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 HSPA9P38646 679 aaKnown RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 RHOAP61586 193 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ZBTB16Q05516 673 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 SLC10A7Q0GE19 358 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 LBRQ14739 615 aaKnown RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 NUMA1Q14980 2115 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 NOMO1Q15155 1222 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 CCDC181Q5TID7 509 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 MARC1Q5VT66 337 aa11.55□□□□□ -0.56
HSPG2-202ENST00000374676 ZNF776Q68DI1 518 aaPredicted RBP11.55□□□□□ -0.56
HSPG2-202ENST00000374676 DPY19L3Q6ZPD9 716 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms