RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 RETSATQ6NUM9 610 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 TEX26Q8N6G2 289 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 CCHCR1Q8TD31 782 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 NSMCE1Q8WV22 266 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 TTC17Q96AE7 1141 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 ZNF419Q96HQ0 510 aaPredicted RBP14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 MED4Q9NPJ6 270 aa14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 UBA2Q9UBT2 640 aaPredicted RBP14.92□□□□□ -0.02
SMPDL3B-201ENST00000373888 TICRRQ7Z2Z1 1910 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 OPHN1O60890 802 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 JCHAINP01591 159 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 SRFP11831 508 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 ETS1P14921 441 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 NUMBP49757 651 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 GEMIN4P57678 1058 aaKnown RBP14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 PFKPQ01813 784 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 SLC10A7Q0GE19 358 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 LBRQ14739 615 aaKnown RBP14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 GEN1Q17RS7 908 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 PREPLQ4J6C6 727 aaPredicted RBP14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 HSP90B2PQ58FF3 399 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 ANKRD20A2Q5SQ80 823 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 ANKRD20A1Q5TYW2 823 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 MARC1Q5VT66 337 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 ANKRD20A3Q5VUR7 823 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 TMEM215Q68D42 235 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 MBLAC2Q68D91 279 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 ZNF567Q8N184 647 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 TERB1Q8NA31 727 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 CCDC110Q8TBZ0 833 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 CASKIN2Q8WXE0 1202 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 SEC14L1Q92503 715 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 TEKT5Q96M29 485 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 TRIM51Q9BSJ1 452 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 SLC2A4RGQ9NR83 387 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 PAK5Q9P286 719 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 TRHDEQ9UKU6 1024 aa14.91□□□□□ -0.02
SMPDL3B-201ENST00000373888 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 ZSCAN5DPP0CG00 497 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 MYBL2P10244 700 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 POLR2EP19388 210 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 RPL22P35268 128 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 ACTN2P35609 894 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 MMP13P45452 471 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 SOX9P48436 509 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 DRG2P55039 364 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 FAM193AP78312 1265 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 CBX1P83916 185 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 KDSRQ06136 332 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 SLC20A2Q08357 652 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 MESP2Q0VG99 397 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 EIF4HQ15056 248 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 TRIP13Q15645 432 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 KCTD19Q17RG1 926 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 NAIF1Q69YI7 327 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 PRUNE1Q86TP1 453 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 METTL3Q86U44 580 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 SUGP1Q8IWZ8 645 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 MREGQ8N565 214 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 CNTD1Q8N815 330 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 ERP44Q9BS26 406 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 CEP41Q9BYV8 373 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 FAM129AQ9BZQ8 928 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 C8orf33Q9H7E9 229 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 KLHL8Q9P2G9 620 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 HS3ST2Q9Y278 367 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 SHROOM3Q8TF72 1996 aa14.9□□□□□ -0.02
SMPDL3B-201ENST00000373888 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 SPECC1L-ADORA2AF8WAN1 911 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 NARSO43776 548 aaKnown RBP14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ASLP04424 464 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 GLULP15104 373 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 CTHP32929 405 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 GRIA2P42262 883 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 SERPINH1P50454 418 aaKnown RBP14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ECT2LQ008S8 904 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ALS2CLQ60I27 953 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 LINGO4Q6UY18 593 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 LEKR1Q6ZMV7 388 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ARHGEF18Q6ZSZ5 1173 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 RALGPS2Q86X27 583 aaPredicted RBP14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 USP33Q8TEY7 942 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 IFT81Q8WYA0 676 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 SEPT3Q9UH03 358 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ASIC3Q9UHC3 531 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 DUSP12Q9UNI6 340 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ATP8A1Q9Y2Q0 1164 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 ACTL7AQ9Y615 435 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 PIAS3Q9Y6X2 628 aa14.89□□□□□ -0.03
SMPDL3B-201ENST00000373888 PRRT4C9JH25 899 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 TIMM44O43615 452 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 KAT7O95251 611 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 MT-CO1P00395 513 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms