RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 KCNMB4Q86W47 210 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 RASSF3Q86WH2 238 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM72BQ86X60 149 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ARHGAP12Q8IWW6 846 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CRIPAKQ8N1N5 446 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CHCHD4Q8N4Q1 142 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 AFAP1L2Q8N4X5 818 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF557Q8N988 423 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 IMP4Q96G21 291 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 TRMT2BQ96GJ1 504 aaKnown RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 NSL1Q96IY1 281 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 VPS39Q96JC1 886 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 FAR2Q96K12 515 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 MYRFLQ96LU7 910 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ASB2Q96Q27 587 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 GPR22Q99680 433 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PAAF1Q9BRP4 392 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 MCMBPQ9BTE3 642 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PPP1R12CQ9BZL4 782 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 KIF9Q9HAQ2 790 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 PLAC1Q9HBJ0 212 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 POPDC3Q9HBV1 291 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 TMLHEQ9NVH6 421 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ABI2Q9NYB9 513 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 COX16Q9P0S2 106 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 MAGED2Q9UNF1 606 aaPredicted RBP8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 TRIM33Q9UPN9 1127 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 ASB3Q9Y575 518 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 HS3ST4Q9Y661 456 aa8.86□□□□□ -0.99
SNRNP40-202ENST00000373720 CXorf49A8MYA2 514 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 RAMP2O60895 175 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CLDN11O75508 207 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 BANF1O75531 89 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 HAUS5O94927 633 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ALDOAP04075 364 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SERPINA6P08185 405 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 EZRP15311 586 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ELNP15502 786 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 PRDX6P30041 224 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 HNRNPH1P31943 449 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CD68P34810 354 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ADRA1AP35348 466 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CSRP3P50461 194 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 APLP1P51693 650 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CACNA2D1P54289 1103 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CDH4P55283 916 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 NCALDP61601 193 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 PITX1P78337 314 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 NSUN2Q08J23 767 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 THOC5Q13769 683 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ZKSCAN8Q15776 578 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 DNAL1Q4LDG9 190 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FAXCQ5TGI0 409 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM171A1Q5VUB5 890 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CGB2Q6NT52 195 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FUT10Q6P4F1 479 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 KLC3Q6P597 504 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FAM47EQ6ZV65 393 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CHST9Q7L1S5 443 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 STRA8Q7Z7C7 330 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CLEC14AQ86T13 490 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SETD3Q86TU7 594 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TMPRSS6Q8IU80 811 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SCN4BQ8IWT1 228 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF683Q8IZ20 524 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TMEM130Q8N3G9 435 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 NPWQ8N729 165 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 OR52K1Q8NGK4 314 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CASP10Q92851 521 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 FBXO32Q969P5 355 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TADA1Q96BN2 335 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF669Q96BR6 464 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 AGAP3Q96P47 875 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TCF12Q99081 682 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TRMOQ9BU70 441 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 POLR1EQ9GZS1 481 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CWH43Q9H720 699 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ATP13A1Q9HD20 1204 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SMYD2Q9NRG4 433 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 C20orf96Q9NUD7 363 aaPredicted RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ABCF3Q9NUQ8 709 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 TMEM30AQ9NV96 361 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 RBM22Q9NW64 420 aaKnown RBP eCLIP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 DNAJC28Q9NX36 388 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SYBUQ9NX95 663 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 NDE1Q9NXR1 346 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 MARCH2Q9P0N8 246 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 SLC17A7Q9P2U7 560 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 COPG2Q9UBF2 871 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 MTRRQ9UBK8 725 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 AFF4Q9UHB7 1163 aaKnown RBP8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 DNMT3LQ9UJW3 386 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 OGDHLQ9ULD0 1010 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 NEU3Q9UQ49 428 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 CHKBQ9Y259 395 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ZNF510Q9Y2H8 683 aa8.85□□□□□ -0.99
SNRNP40-202ENST00000373720 ACOT9Q9Y305 439 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms