RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KNL1Q8NG31 2342 aa23.14■■□□□ 1.29
COL9A2-201ENST00000372736 A0A087X0T9 212 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 A0A1B0GVT2 93 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 WASH4PA8MWX3 477 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 RNF103O00237 685 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 PLRG1O43660 514 aaKnown RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 OPHN1O60890 802 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 ADRB1P08588 477 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 FAM228BP0C875 321 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 CSRP1P21291 193 aaKnown RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 CSNK1EP49674 416 aaKnown RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 CCR5P51681 352 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 PPP2CBP62714 309 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 PPP2CAP67775 309 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 POLD3Q15054 466 aaPredicted RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 CA9Q16790 459 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 PSAPL1Q6NUJ1 521 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 DPY19L3Q6ZPD9 716 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 VPS36Q86VN1 386 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 TMIEQ8NEW7 156 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 SNRNP25Q9BV90 132 aaKnown RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 EBF2Q9HAK2 575 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 MRPL47Q9HD33 250 aaKnown RBP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.13■■□□□ 1.29
COL9A2-201ENST00000372736 TMEM131Q92545 1883 aa23.13■■□□□ 1.29
COL9A2-201ENST00000372736 A0A1W2PPC4 97 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 UPK3BL1B0FP48 263 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 UPK3BL2E5RIL1 263 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 GIPC1O14908 333 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 FGF10O15520 208 aaPredicted RBP23.12■■□□□ 1.29
COL9A2-201ENST00000372736 LRCH4O75427 683 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 MIPP30301 263 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 HNRNPH3P31942 346 aaKnown RBP23.12■■□□□ 1.29
COL9A2-201ENST00000372736 HTR7P34969 479 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 GRIA4P48058 902 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 NOVA1P51513 510 aaKnown RBP23.12■■□□□ 1.29
COL9A2-201ENST00000372736 TPI1P60174 286 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 NFKBIBQ15653 356 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 PIP5KL1Q5T9C9 394 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 LAYNQ6UX15 382 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 PIP4P1Q86T03 277 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 RNF214Q8ND24 703 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 GRIN3AQ8TCU5 1115 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 ARRDC3Q96B67 414 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 CATSPERBQ9H7T0 1116 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 IL36AQ9UHA7 158 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 PCSK1NQ9UHG2 260 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 NENFQ9UMX5 172 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 WASF2Q9Y6W5 498 aa23.12■■□□□ 1.29
COL9A2-201ENST00000372736 KPNA3O00505 521 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-201ENST00000372736 CBFA2T2O43439 604 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 LATO43561 262 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 RNF8O76064 485 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 PRNPP04156 253 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 RECQLP46063 649 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-201ENST00000372736 GEMIN4P57678 1058 aaKnown RBP23.11■■□□□ 1.29
COL9A2-201ENST00000372736 TAS2R38P59533 333 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 ERMARDQ5T6L9 678 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 SPECC1LQ69YQ0 1117 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 DEFB124Q8NES8 71 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 ISG20Q96AZ6 181 aaKnown RBP23.11■■□□□ 1.29
COL9A2-201ENST00000372736 SLC6A18Q96N87 628 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 KCTD15Q96SI1 283 aaPredicted RBP23.11■■□□□ 1.29
COL9A2-201ENST00000372736 THAP2Q9H0W7 228 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 KDM4CQ9H3R0 1056 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 HPCAL4Q9UM19 191 aa23.11■■□□□ 1.29
COL9A2-201ENST00000372736 EIF3CLB5ME19 914 aaKnown RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 KDELR3O43731 214 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 PRPSAP2O60256 369 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 LEFTY1O75610 366 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 CD59P13987 128 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 CCNHP51946 323 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 RACK1P63244 317 aaKnown RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 TEAD4Q15561 434 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 CARD16Q5EG05 197 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 ARSIQ5FYB1 569 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 N4BP2L1Q5TBK1 243 aaPredicted RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 LEKR1Q6ZMV7 388 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 UMODL1-AS1Q8N2C9 162 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 HMCESQ96FZ2 354 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 EIF3CQ99613 913 aaKnown RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 DNAJC7Q99615 494 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 TM6SF2Q9BZW4 377 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 KLC2Q9H0B6 622 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 DHX35Q9H5Z1 703 aaKnown RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 IL21RQ9HBE5 538 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 TPX2Q9ULW0 747 aaKnown RBP23.1■■□□□ 1.29
COL9A2-201ENST00000372736 DOCK9Q9BZ29 2069 aa23.1■■□□□ 1.29
COL9A2-201ENST00000372736 PCNX2A6NKB5 2137 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3DA0A087WVF3 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3IA0A087WXS9 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3EA0A087X179 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3KA0A087X1G2 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3FA6NER0 549 aaPredicted RBP23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3LB9A6J9 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 RASA4BC9J798 803 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 RASA4O43374 803 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 CER1O95813 267 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 TBC1D3HP0C7X1 549 aa23.09■■□□□ 1.29
COL9A2-201ENST00000372736 CEACAM1P13688 526 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms