RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 RHOXF2Q9BQY4 288 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 DCLK3Q9C098 648 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 SLC7A5P2Q9GIP4 190 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 OLA1Q9NTK5 396 aaKnown RBP7.18□□□□□ -1.26
USP1-202ENST00000371146 UBAP1Q9NZ09 502 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 GMEB1Q9Y692 573 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 NUP205Q92621 2012 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 F9P00740 461 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 FGGP02679 453 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 TARSP26639 723 aaKnown RBP7.18□□□□□ -1.26
USP1-202ENST00000371146 ADRA1BP35368 520 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 SGSHP51688 502 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 INHBCP55103 352 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 C1orf61Q13536 156 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 ARHGEF7Q14155 803 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 KRT33BQ14525 404 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 MPPE1Q53F39 396 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 FAM171BQ6P995 826 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 ARHGEF18Q6ZSZ5 1173 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 TAS2R42Q7RTR8 314 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 MFSD6LQ8IWD5 586 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 LRRC8AQ8IWT6 810 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 SREK1Q8WXA9 508 aaKnown RBP7.18□□□□□ -1.26
USP1-202ENST00000371146 IGSF8Q969P0 613 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 MAGOHBQ96A72 148 aaKnown RBP7.18□□□□□ -1.26
USP1-202ENST00000371146 NAA15Q9BXJ9 866 aaKnown RBP7.18□□□□□ -1.26
USP1-202ENST00000371146 CAPS2Q9BXY5 557 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 KCNF1Q9H3M0 494 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 IGSF9Q9P2J2 1179 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 KLHL42Q9P2K6 505 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 NCKAP1Q9Y2A7 1128 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 IKBKGQ9Y6K9 419 aa7.18□□□□□ -1.26
USP1-202ENST00000371146 CCL22O00626 93 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 FFAR2O15552 330 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 IDO1P14902 403 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ZFXP17010 805 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 PAPOLAP51003 745 aaKnown RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 NEK2P51955 445 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 MAMLD1Q13495 774 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 DMC1Q14565 340 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 MYBPC3Q14896 1274 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CNGA3Q16281 694 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
USP1-202ENST00000371146 KIAA1211LQ6NV74 962 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SPOCD1Q6ZMY3 1216 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 IRF2BP2Q7Z5L9 587 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 STK40Q8N2I9 435 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LPCAT1Q8NF37 534 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LMO3Q8TAP4 145 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 GORASP1Q9BQQ3 440 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 C2orf49Q9BVC5 232 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 RC3H2Q9HBD1 1191 aaKnown RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 POLMQ9NP87 494 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 ELOVL2Q9NXB9 296 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 WDR35Q9P2L0 1181 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 STK39Q9UEW8 545 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 EIF2B4Q9UI10 523 aaKnown RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 CROTQ9UKG9 612 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 PPP2R2CQ9Y2T4 447 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 COQ4Q9Y3A0 265 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 COL4A6Q14031 1691 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 E2F8A0AVK6 867 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 E9PAM4 449 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 TMEM189-UBE2V1I3L0A0 370 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 LIN7AO14910 233 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 MCF2LO15068 1137 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ALDH1A2O94788 518 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CYP17A1P05093 508 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CYP11A1P05108 521 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CHRNB2P17787 502 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ITGB6P18564 788 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 THOP1P52888 689 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ACOX1Q15067 660 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 RCN1Q15293 331 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SEPT7Q16181 437 aaKnown RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 ARSIQ5FYB1 569 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 C12orf40Q86WS4 652 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CAMK1DQ8IU85 385 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ADGRG2Q8IZP9 1017 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 HJURPQ8NCD3 748 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 KRT35Q92764 455 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 GPR63Q9BZJ6 419 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 CATSPERBQ9H7T0 1116 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 C6orf203Q9P0P8 240 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 CIDEBQ9UHD4 219 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 COQ6Q9Y2Z9 468 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SPO11Q9Y5K1 396 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ANKRD11Q6UB99 2663 aaPredicted RBP7.17□□□□□ -1.26
USP1-202ENST00000371146 USP27XA6NNY8 438 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 FAM25EA8MYX2 175 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 GOLGA8KD6RF30 607 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 C5orf67F2Z3F1 127 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 GOLGA8TH3BQL2 631 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ZNF185O15231 689 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 ARHGAP6O43182 974 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 AKT1P31749 480 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 TAS2R40P59535 323 aa7.17□□□□□ -1.26
USP1-202ENST00000371146 SPEM2Q0P670 501 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms