RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 EPS8L1Q8TE68 723 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 LRIG1Q96JA1 1093 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 BBC3Q96PG8 261 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 SPON2Q9BUD6 331 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 C2orf49Q9BVC5 232 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 METTL5Q9NRN9 209 aaKnown RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 RRN3Q9NYV6 651 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 CHMP5Q9NZZ3 219 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 DMTF1Q9Y222 760 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FCF1Q9Y324 198 aaKnown RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 MYLKQ15746 1914 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 KNTC1P50748 2209 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FAM72CH0Y354 149 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PRAMEF26H0Y7S4 382 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 RAD51BO15315 384 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SIGLEC6O43699 453 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 LEFTY1O75610 366 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 GFPT2O94808 682 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 THEGLP0DJG4 465 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 OR1E1P30953 314 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 GKP32189 559 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 ACVRL1P37023 503 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SCNN1AP37088 669 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SNX16P57768 344 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FMO1Q01740 532 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SETMARQ53H47 684 aaPredicted RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 HES3Q5TGS1 186 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FAM72AQ5TYM5 149 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FAM72DQ6L9T8 149 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 GCNT7Q6ZNI0 430 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 IQCHQ86VS3 1027 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FAM72BQ86X60 149 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 DRC7Q8IY82 874 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PDCD7Q8N8D1 485 aaKnown RBP13.45□□□□□ -0.26
RPF1-201ENST00000370654 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 OR13H1Q8NG92 308 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 SLC30A5Q8TAD4 765 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 KLHDC7BQ96G42 594 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PPP1R9BQ96SB3 815 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 PREBQ9HCU5 417 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 NEU3Q9UQ49 428 aa13.45□□□□□ -0.26
RPF1-201ENST00000370654 YKT6O15498 198 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 TLX3O43711 291 aaPredicted RBP13.44□□□□□ -0.26
RPF1-201ENST00000370654 F9P00740 461 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 CYP1A1P04798 512 aaPredicted RBP13.44□□□□□ -0.26
RPF1-201ENST00000370654 JUPP14923 745 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 MTA1Q13330 715 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 CDO1Q16878 200 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 ZNF542PQ5EBM4 170 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 TPRG1LQ5T0D9 272 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 LRRC31Q6UY01 552 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 LEKR1Q6ZMV7 388 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 ERN2Q76MJ5 926 aaKnown RBP13.44□□□□□ -0.26
RPF1-201ENST00000370654 HORMAD1Q86X24 394 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 NETO2Q8NC67 525 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 OR6K2Q8NGY2 324 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 BMFQ96LC9 184 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 HAPLN3Q96S86 360 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 VPS16Q9H269 839 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 IL36AQ9UHA7 158 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 GGT7Q9UJ14 662 aa13.44□□□□□ -0.26
RPF1-201ENST00000370654 TPX2Q9ULW0 747 aaKnown RBP13.44□□□□□ -0.26
RPF1-201ENST00000370654 TDRD6O60522 2096 aaKnown RBP13.44□□□□□ -0.26
RPF1-201ENST00000370654 ILVBLA1L0T0 632 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 FFAR2O15552 330 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 PCDH8O95206 1070 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 LSM8O95777 96 aaKnown RBP13.43□□□□□ -0.26
RPF1-201ENST00000370654 CKMT2P17540 419 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 DGKAP23743 735 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 ITPKBP27987 946 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 SERPINH1P50454 418 aaKnown RBP13.43□□□□□ -0.26
RPF1-201ENST00000370654 DNA2P51530 1060 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 JAM2P57087 298 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 INSM1Q01101 510 aaPredicted RBP13.43□□□□□ -0.26
RPF1-201ENST00000370654 GNA12Q03113 381 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 PTP4A2Q12974 167 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 TMEM259Q4ZIN3 620 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 C6orf118Q5T5N4 469 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 NLRP14Q86W24 1093 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 CCDC185Q8N715 623 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 RXFP2Q8WXD0 754 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 C11orf70Q9BRQ4 267 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 HDAC8Q9BY41 377 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 TM6SF2Q9BZW4 377 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 ZYG11BQ9C0D3 744 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 NUP62CLQ9H1M0 184 aa13.43□□□□□ -0.26
RPF1-201ENST00000370654 ATP13A1Q9HD20 1204 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms