RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PCSK1P29120 753 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 NSFP46459 744 aaKnown RBP3.71□□□□□ -1.82
MCF2-202ENST00000370573 GPC5P78333 572 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 FAPQ12884 760 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PDCLQ13371 301 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 NR0B2Q15466 257 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 STILQ15468 1287 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PTPN14Q15678 1187 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ALFQ53S48 1182 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ZNF569Q5MCW4 686 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 SPOUT1Q5T280 376 aaKnown RBP3.71□□□□□ -1.82
MCF2-202ENST00000370573 CYP4A22Q5TCH4 519 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 MBLAC2Q68D91 279 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PLEKHA7Q6IQ23 1121 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 LILRA6Q6PI73 481 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PRSS55Q6UWB4 352 aaPredicted RBP3.71□□□□□ -1.82
MCF2-202ENST00000370573 CEP57Q86XR8 500 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 CPNE8Q86YQ8 564 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 THEM5Q8N1Q8 247 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 SLC35F6Q8N357 371 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ZMIZ2Q8NF64 920 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PHOSPHO2Q8TCD6 241 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 MYLPFQ96A32 169 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ZNF653Q96CK0 615 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 PCED1BQ96HM7 432 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 RAD9AQ99638 391 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 SMOQ99835 787 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 TTPALQ9BTX7 342 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 CRB3Q9BUF7 120 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 DUSP16Q9BY84 665 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 TRIM7Q9C029 511 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ZNF518BQ9C0D4 1074 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ZCWPW1Q9H0M4 648 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 IPPKQ9H8X2 491 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 GPR27Q9NS67 375 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 SPG21Q9NZD8 308 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 ADAM22Q9P0K1 906 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 CNOT8Q9UFF9 292 aaKnown RBP3.71□□□□□ -1.82
MCF2-202ENST00000370573 FBXL7Q9UJT9 491 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 GTF2A1LQ9UNN4 478 aa3.71□□□□□ -1.82
MCF2-202ENST00000370573 RANBP2P49792 3224 aaKnown RBP3.71□□□□□ -1.82
MCF2-202ENST00000370573 SF3B1O75533 1304 aaKnown RBP eCLIP3.71□□□□□ -1.82
MCF2-202ENST00000370573 KIAA1671Q9BY89 1806 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 A0A0A6YYK5 440 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 MYOCOSA0A1B0GUC4 107 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GRID2IPA4D2P6 1211 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GOLGA6L9A6NEM1 432 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 HHLA1C9JL84 531 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 NPIPB6E9PJ23 425 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KCNK3O14649 394 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KRT86O43790 486 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 BUB1BO60566 1050 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 MTA2O94776 668 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GSTM1P09488 218 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TNNT1P13805 278 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RPL17P18621 184 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 LAG3P18627 525 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 C5AR1P21730 350 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GABRB2P47870 512 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RPL34P49207 117 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 GNG11P61952 73 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SMAD3P84022 425 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 YWHAHQ04917 246 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 ELAVL2Q12926 359 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 MAMLD1Q13495 774 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KRT72Q14CN4 511 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 CTXN3Q4LDR2 81 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SLC39A12Q504Y0 691 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CCDC70Q6NSX1 233 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SYT10Q6XYQ8 523 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CLEC20AQ6ZU45 233 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TMEM110Q86TL2 294 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 NLRC5Q86WI3 1866 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 XYLT1Q86Y38 959 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SLC41A1Q8IVJ1 513 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RNF10Q8N5U6 811 aaKnown RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 EFHBQ8N7U6 833 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 LRRC57Q8N9N7 239 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TEX19Q8NA77 164 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RCBTB1Q8NDN9 531 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CTNNBL1Q8WYA6 563 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 RIN2Q8WYP3 895 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 RFFLQ8WZ73 363 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TMEM169Q96HH4 297 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 VCPIP1Q96JH7 1222 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 KCNK16Q96T55 309 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TBCBQ99426 244 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ELF4Q99607 663 aaPredicted RBP3.7□□□□□ -1.82
MCF2-202ENST00000370573 MED10Q9BTT4 135 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 NUP85Q9BW27 656 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 TSGA10Q9BZW7 698 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 RNF38Q9H0F5 515 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 SLC6A17Q9H1V8 727 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CDIP1Q9H305 208 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 GOLPH3Q9H4A6 298 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 ERVK13-1Q9NX77 482 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 CTTNBP2NLQ9P2B4 639 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 HESX1Q9UBX0 185 aa3.7□□□□□ -1.82
MCF2-202ENST00000370573 INSL6Q9Y581 213 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms