RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CST6Q15828 149 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 PEX26Q7Z412 305 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RFX6Q8HWS3 928 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 KATNAL2Q8IYT4 538 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RYBPQ8N488 228 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 FAM160A2Q8N612 972 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 LRRC57Q8N9N7 239 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 GRIN3AQ8TCU5 1115 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 GANCQ8TET4 914 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 KRT35Q92764 455 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 NKD2Q969F2 451 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RBM41Q96IZ5 413 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ZNF830Q96NB3 372 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 LZTFL1Q9NQ48 299 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 CAPN6Q9Y6Q1 641 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 MYO15AQ9UKN7 3530 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 CCDC66A2RUB6 948 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 C3orf70A6NLC5 250 aaPredicted RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 C1QTNF3-AMACRE9PGA6 284 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 J3KR12 359 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 APOL1O14791 398 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ALOX15BO15296 676 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 MAP3K13O43283 966 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 HRO43593 1189 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 FTCDO95954 541 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ADH1BP00325 375 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 P2RY2P41231 377 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RHOAP61586 193 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 DYNLT1P63172 113 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 PAFAH1B3Q15102 231 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ELF2Q15723 593 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 LPAL2Q16609 132 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 MAP7D1Q3KQU3 841 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ARHGAP36Q6ZRI8 547 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RNF10Q8N5U6 811 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 OR2A12Q8NGT7 310 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ISG20Q96AZ6 181 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 SEMA4AQ9H3S1 761 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 PDFQ9HBH1 243 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 CD93Q9NPY3 652 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 USP36Q9P275 1121 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 IPO11Q9UI26 975 aaKnown RBP15.11■□□□□ 0.01
COL9A1-204ENST00000370496 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 PPP2R2CQ9Y2T4 447 aa15.11■□□□□ 0.01
COL9A1-204ENST00000370496 SPAG17Q6Q759 2223 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 MID1O15344 667 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 ZRANB2O95218 330 aaKnown RBP eCLIP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 MAP3K6O95382 1288 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 CD160O95971 181 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 IGSF6O95976 241 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 GSRP00390 522 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 BCKDHBP21953 392 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 CTNNA2P26232 953 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 TPMTP51580 245 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 CCNHP51946 323 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 SNRPD1P62314 119 aaKnown RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 IL10RBQ08334 325 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 SFSWAPQ12872 951 aaKnown RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 INO80DQ53TQ3 878 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 FAM46CQ5VWP2 391 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 MFSD7Q6UXD7 560 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 SLC36A4Q6YBV0 504 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 SPOCD1Q6ZMY3 1216 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 FAM124AQ86V42 546 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 TP53INP2Q8IXH6 220 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 PQLC3Q8N755 202 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 OR2AP1Q8NGE2 309 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 EXD1Q8NHP7 514 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 NSMCE1Q8WV22 266 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 GDAP1L1Q96MZ0 367 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 CINPQ9BW66 212 aaPredicted RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 PABPC3Q9H361 631 aaKnown RBP15.1■□□□□ 0.01
COL9A1-204ENST00000370496 ZDHHC6Q9H6R6 413 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 IL36AQ9UHA7 158 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 SCML1Q9UN30 329 aa15.1■□□□□ 0.01
COL9A1-204ENST00000370496 VPS13AQ96RL7 3174 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 IGHV1OR15-9A0A0B4J2B8 117 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 KPNA3O00505 521 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 MCF2LO15068 1137 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 NDUFS2O75306 463 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 RNASEH2AO75792 299 aaKnown RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 LMNAP02545 664 aaKnown RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 PRNPP04156 253 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 ZFXP17010 805 aaPredicted RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 C5AR1P21730 350 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CD6P30203 668 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 OXTRP30559 389 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CHRNA3P32297 505 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 SLC8A1P32418 973 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CDKN2BP42772 138 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 RPL6Q02878 288 aaKnown RBP15.09■□□□□ 0.01
COL9A1-204ENST00000370496 GBE1Q04446 702 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 CCDC173Q0VFZ6 552 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 GALNT2Q10471 571 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 TFDP2Q14188 446 aa15.09■□□□□ 0.01
COL9A1-204ENST00000370496 ZNF235Q14590 738 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms