RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SLC20A2Q08357 652 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 SLC10A7Q0GE19 358 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 HTR4Q13639 388 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 RUNX3Q13761 415 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 KCTD19Q17RG1 926 aaPredicted RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 PUS10Q3MIT2 529 aaKnown RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 PPP1R21Q6ZMI0 780 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 AHI1Q8N157 1196 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 CPT1BQ92523 772 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 ZFYVE19Q96K21 471 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 LMLNQ96KR4 655 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 FRMD8Q9BZ67 464 aaPredicted RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 EIF2B3Q9NR50 452 aaKnown RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 SEPT3Q9UH03 358 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 SHROOM3Q8TF72 1996 aa12.54□□□□□ -0.4
TUBE1-202ENST00000368662 KIF26AQ9ULI4 1882 aaPredicted RBP12.54□□□□□ -0.4
TUBE1-202ENST00000368662 ZMPSTE24O75844 475 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ANXA9O76027 345 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 METTL18O95568 372 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PABPC1P11940 636 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ARSAP15289 507 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 TPSB2P20231 275 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 GDI1P31150 447 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 DGKGP49619 791 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 SARNPP82979 210 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 GRM2Q14416 872 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 TPSAB1Q15661 275 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PREPLQ4J6C6 727 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PITRM1Q5JRX3 1037 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ZDHHC24Q6UX98 284 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 KIAA0907Q7Z7F0 614 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 CNTD1Q8N815 330 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 NAT8LQ8N9F0 302 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 WFIKKN2Q8TEU8 576 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 USP33Q8TEY7 942 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PSKH2Q96QS6 385 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 FCRL5Q96RD9 977 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PLA2G2FQ9BZM2 168 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 POLR1EQ9GZS1 481 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 HPS4Q9NQG7 708 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 DNAJC17Q9NVM6 304 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 VPS51Q9UID3 782 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ATP8A1Q9Y2Q0 1164 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 AAR2Q9Y312 384 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 TTLL3Q9Y4R7 772 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 EYSQ5T1H1 3165 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PSMD3O43242 534 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 HLA-DQB2P05538 268 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 APRTP07741 180 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 H2AFXP16104 143 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 NFKB1P19838 968 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 CES1P23141 567 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PSMB4P28070 264 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 CD68P34810 354 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 LMAN1P49257 510 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ARF5P84085 180 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 KCNJ11Q14654 390 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 SMAD2Q15796 467 aaKnown RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 ETFBKMTQ8IXQ9 262 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 APCDD1Q8J025 514 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PRCCQ92733 491 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 CINPQ9BW66 212 aaPredicted RBP12.53□□□□□ -0.4
TUBE1-202ENST00000368662 SLC25A51Q9H1U9 297 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 GLOD4Q9HC38 313 aa12.53□□□□□ -0.4
TUBE1-202ENST00000368662 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.52□□□□□ -0.4
TUBE1-202ENST00000368662 TP73O15350 636 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 SNAP91O60641 907 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 MYBL2P10244 700 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 GLDCP23378 1020 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 EIF2DP41214 584 aaKnown RBP12.52□□□□□ -0.4
TUBE1-202ENST00000368662 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 ALG1LQ6GMV1 187 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 ZCCHC9Q8N567 271 aaKnown RBP12.52□□□□□ -0.4
TUBE1-202ENST00000368662 NAT16Q8N8M0 369 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 AENQ8WTP8 325 aaKnown RBP12.52□□□□□ -0.4
TUBE1-202ENST00000368662 PHACTR1Q9C0D0 580 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 BRD9Q9H8M2 597 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 NT5MQ9NPB1 228 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 VPS45Q9NRW7 570 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 DEC1Q9P2X7 70 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 SLC25A13Q9UJS0 675 aa12.52□□□□□ -0.4
TUBE1-202ENST00000368662 MYOFQ9NZM1 2061 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 C2CD4DB7Z1M9 353 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 TULP3O75386 442 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 SP100P23497 879 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 ITKQ08881 620 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 SLMAPQ14BN4 828 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 FUT11Q495W5 492 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 TAB3Q8N5C8 712 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 MCUQ8NE86 351 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.41
TUBE1-202ENST00000368662 ANKRD7Q92527 254 aa12.52□□□□□ -0.41
TUBE1-202ENST00000368662 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms