RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TRPM6Q9BX84 2022 aa16.38■□□□□ 0.21
CKS1B-202ENST00000368436 TRIM38O00635 465 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ZMPSTE24O75844 475 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ENDOD1O94919 500 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 THEGLP0DJG4 465 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 UCHL3P15374 230 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 GLDCP23378 1020 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 SLC20A2Q08357 652 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 TARDBPQ13148 414 aaKnown RBP eCLIP16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ZNF211Q13398 564 aaPredicted RBP16.37■□□□□ 0.21
CKS1B-202ENST00000368436 RTP5Q14D33 572 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 C2CD6Q53TS8 623 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ARSIQ5FYB1 569 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 TAF3Q5VWG9 929 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ERN2Q76MJ5 926 aaKnown RBP16.37■□□□□ 0.21
CKS1B-202ENST00000368436 RFFLQ8WZ73 363 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 KLK6Q92876 244 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 STK33Q9BYT3 514 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 CEP44Q9C0F1 390 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 NRSN2Q9GZP1 204 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 DYRK4Q9NR20 520 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 IL36AQ9UHA7 158 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 ZFR2Q9UPR6 939 aaKnown RBP16.37■□□□□ 0.21
CKS1B-202ENST00000368436 IGSF10Q6WRI0 2623 aa16.37■□□□□ 0.21
CKS1B-202ENST00000368436 SIGLEC6O43699 453 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 SRGAP2O75044 1071 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 SDC3O75056 442 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 PRLRP16471 622 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 HNRNPA2B1P22626 353 aaKnown RBP16.36■□□□□ 0.21
CKS1B-202ENST00000368436 DGKAP23743 735 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 NOMO3P69849 1222 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 TMEM259Q4ZIN3 620 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 DPY19L3Q6ZPD9 716 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 ABI3BPQ7Z7G0 1075 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 EPS8L1Q8TE68 723 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 CFAP57Q96MR6 1250 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 ZYG11BQ9C0D3 744 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 TNKS2Q9H2K2 1166 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 PPARGC1AQ9UBK2 798 aaKnown RBP16.36■□□□□ 0.21
CKS1B-202ENST00000368436 DACH1Q9UI36 760 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 WASF2Q9Y6W5 498 aa16.36■□□□□ 0.21
CKS1B-202ENST00000368436 CXorf51AA0A1B0GTR3 108 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 F8VZ95 297 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 GOLGA8SH3BPF8 625 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 LEFTY1O75610 366 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 MMEP08473 750 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 AKT2P31751 481 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 RECQLP46063 649 aaPredicted RBP16.35■□□□□ 0.21
CKS1B-202ENST00000368436 SERPINH1P50454 418 aaKnown RBP16.35■□□□□ 0.21
CKS1B-202ENST00000368436 ARF5P84085 180 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 GNA12Q03113 381 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 ACAP1Q15027 740 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 TCP11X2Q5H9J9 407 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 GCNT7Q6ZNI0 430 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 FAM131BQ86XD5 332 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 PCDH20Q8N6Y1 951 aaKnown RBP16.35■□□□□ 0.21
CKS1B-202ENST00000368436 OR13H1Q8NG92 308 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 OR4C6Q8NH72 309 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 FAM174AQ8TBP5 190 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 GRIN3AQ8TCU5 1115 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 CPA5Q8WXQ8 436 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 IFT43Q96FT9 208 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 PPP1R16AQ96I34 528 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 MYOCQ99972 504 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 SPON2Q9BUD6 331 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 ATP13A1Q9HD20 1204 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 FZD3Q9NPG1 666 aa16.35■□□□□ 0.21
CKS1B-202ENST00000368436 SAMSN1Q9NSI8 373 aaKnown RBP16.35■□□□□ 0.21
CKS1B-202ENST00000368436 FAM170AA1A519 330 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 PCDH8O95206 1070 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 CD160O95971 181 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 GIMD1P0DJR0 217 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 ITGB7P26010 798 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
CKS1B-202ENST00000368436 L1CAMP32004 1257 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 E2F1Q01094 437 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 INSM1Q01101 510 aaPredicted RBP16.34■□□□□ 0.21
CKS1B-202ENST00000368436 NRG1Q02297 640 aaPredicted RBP16.34■□□□□ 0.21
CKS1B-202ENST00000368436 CARD16Q5EG05 197 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
CKS1B-202ENST00000368436 NAA35Q5VZE5 725 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 ZNF677Q86XU0 584 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 DCBLD1Q8N8Z6 715 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 HEPHQ9BQS7 1158 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 RETREG1Q9H6L5 497 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 GPR27Q9NS67 375 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 UCKL1Q9NWZ5 548 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 CLCA2Q9UQC9 943 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 HS3ST3A1Q9Y663 406 aa16.34■□□□□ 0.21
CKS1B-202ENST00000368436 TLX3O43711 291 aaPredicted RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 AP1G1O43747 822 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 PIAS2O75928 621 aa16.33■□□□□ 0.2
CKS1B-202ENST00000368436 CYP1A1P04798 512 aaPredicted RBP16.33■□□□□ 0.2
CKS1B-202ENST00000368436 ADRB3P13945 408 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms