RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CD6P30203 668 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 L1CAMP32004 1257 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 ACSL1P33121 698 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 OXCT1P55809 520 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 KRT83P78385 493 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 SULT2A1Q06520 285 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 CST6Q15828 149 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 UNQ6494/PRO21346Q6UXR6 183 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 RABEPKQ7Z6M1 372 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 HDDC3Q8N4P3 179 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 MINDY1Q8N5J2 469 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 RTL3Q8N8U3 475 aaKnown RBP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 CHST14Q8NCH0 376 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 OR6K2Q8NGY2 324 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 FNIP1Q8TF40 1166 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 HMCESQ96FZ2 354 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 CCDC42Q96M95 316 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 SCNM1Q9BWG6 230 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 TMEM121BQ9BXQ6 578 aaPredicted RBP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 TM6SF2Q9BZW4 377 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 PABPC3Q9H361 631 aaKnown RBP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 NOL6Q9H6R4 1146 aaKnown RBP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 ITM2CQ9NQX7 267 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 WSB2Q9NYS7 404 aaPredicted RBP14.98□□□□□ -0.01
SF3B5-201ENST00000367569 SUN2Q9UH99 717 aa14.98□□□□□ -0.01
SF3B5-201ENST00000367569 TMEM131Q92545 1883 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 KNL1Q8NG31 2342 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 SSU72P8A0A1W2PR75 194 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 OPHN1O60890 802 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 RNASEH2AO75792 299 aaKnown RBP14.97□□□□□ -0.01
SF3B5-201ENST00000367569 ZMPSTE24O75844 475 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 IL1BP01584 269 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 H2AFZP0C0S5 128 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 NNMTP40261 264 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 MAPKAPK2P49137 400 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 DNA2P51530 1060 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 FAM193AP78312 1265 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 E2F5Q15329 346 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 ERMARDQ5T6L9 678 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 H2AFVQ71UI9 128 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 TP53INP2Q8IXH6 220 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 AADATQ8N5Z0 425 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 NPWQ8N729 165 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 SPC24Q8NBT2 197 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 ARHGEF2Q92974 986 aaKnown RBP14.97□□□□□ -0.01
SF3B5-201ENST00000367569 MRFAP1L1Q96HT8 127 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 FAM129BQ96TA1 746 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 C6orf106Q9H6K1 298 aaPredicted RBP14.97□□□□□ -0.01
SF3B5-201ENST00000367569 SARDHQ9UL12 918 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 SLCO1B1Q9Y6L6 691 aa14.97□□□□□ -0.01
SF3B5-201ENST00000367569 DOCK9Q9BZ29 2069 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 ATP9BO43861 1147 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 CTSLP07711 333 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 CD59P13987 128 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 GKP32189 559 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 SERPINH1P50454 418 aaKnown RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 TAS2R40P59535 323 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 SIM1P81133 766 aaPredicted RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 SLC25A11Q02978 314 aaKnown RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 ELAVL3Q14576 367 aaKnown RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 POLD3Q15054 466 aaPredicted RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 WDR45BQ5MNZ6 344 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 ACBD5Q5T8D3 534 aaPredicted RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 RFX8Q6ZV50 586 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 FOXJ1Q92949 421 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 MIR1-1HGQ9H1L0 117 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 DNAAF2Q9NVR5 837 aaKnown RBP14.96□□□□□ -0.01
SF3B5-201ENST00000367569 FBXL12Q9NXK8 326 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 IP6K2Q9UHH9 426 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 HS3ST2Q9Y278 367 aa14.96□□□□□ -0.01
SF3B5-201ENST00000367569 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 SOWAHDA6NJG2 315 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 RASA4BC9J798 803 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 DAPK3O43293 454 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 RASA4O43374 803 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 HYAL3O43820 417 aaPredicted RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 RNASEH1O60930 286 aaKnown RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 GJB3O75712 270 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 CD160O95971 181 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 SYPP08247 313 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 CD48P09326 243 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 TMEM253P0C7T8 217 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 RARAP10276 462 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 SLC8A1P32418 973 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 AIF1P55008 147 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 MESDQ14696 234 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 ATP13A4Q4VNC1 1196 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 ATXN7L2Q5T6C5 722 aaPredicted RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 DCAF12L1Q5VU92 463 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 LAYNQ6UX15 382 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 ARHGAP36Q6ZRI8 547 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 RYBPQ8N488 228 aaPredicted RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 ZCCHC9Q8N567 271 aaKnown RBP14.95□□□□□ -0.02
SF3B5-201ENST00000367569 KDM1BQ8NB78 822 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 DNASE2BQ8WZ79 361 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 OR8D1Q8WZ84 308 aa14.95□□□□□ -0.02
SF3B5-201ENST00000367569 GATA6Q92908 595 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms