RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 BHLHE22Q8NFJ8 381 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-202ENST00000367279 ZSCAN18Q8TBC5 510 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-202ENST00000367279 HASPINQ8TF76 798 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 NXNL1Q96CM4 212 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 NMD3Q96D46 503 aaKnown RBP12.53□□□□□ -0.4
PTPN7-202ENST00000367279 FICDQ9BVA6 458 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 CRTAC1Q9NQ79 661 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 APPL1Q9UKG1 709 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 CASTOR2A6NHX0 329 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 TMEM114B3SHH9 223 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 FYNP06241 537 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 PLK1P53350 603 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 MTTPP55157 894 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 DAOAP59103 153 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
PTPN7-202ENST00000367279 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 LIPMQ5VYY2 423 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 NAPEPLDQ6IQ20 393 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 ZNF280DQ6N043 979 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 C16orf89Q6UX73 402 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
PTPN7-202ENST00000367279 LPPQ93052 612 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 PCED1BQ96HM7 432 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 IL22Q9GZX6 179 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 RAP2CQ9Y3L5 183 aa12.53□□□□□ -0.4
PTPN7-202ENST00000367279 RGSL1A5PLK6 1076 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 NEMP2A6NFY4 417 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 CLGNO14967 610 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 NPY2RP49146 381 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 AFF1P51825 1210 aaKnown RBP12.52□□□□□ -0.4
PTPN7-202ENST00000367279 SMYD5Q6GMV2 418 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 FAM35AQ86V20 835 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 SATL1Q86VE3 508 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.4
PTPN7-202ENST00000367279 IFT43Q96FT9 208 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 SMOQ99835 787 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 MID2Q9UJV3 735 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 ACOT9Q9Y305 439 aa12.52□□□□□ -0.4
PTPN7-202ENST00000367279 AHSGP02765 367 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 CTSHP09668 335 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 ARSAP15289 507 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 PMLP29590 882 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 ITKQ08881 620 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTPN7-202ENST00000367279 SH2D4BQ5SQS7 431 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 ESRP1Q6NXG1 681 aaKnown RBP12.52□□□□□ -0.41
PTPN7-202ENST00000367279 IYDQ6PHW0 289 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 LAYNQ6UX15 382 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 MFN1Q8IWA4 741 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 PQLC1Q8N2U9 271 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 DCUN1D1Q96GG9 259 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 GAD1Q99259 594 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 NDNQ99608 321 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 TINF2Q9BSI4 451 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 FSD1LQ9BXM9 530 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 SUDS3Q9H7L9 328 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-202ENST00000367279 CLIC5Q9NZA1 410 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 CLEC11AQ9Y240 323 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 MYOCOSA0A1B0GUC4 107 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 KIF3CO14782 793 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 DDHD2O94830 711 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 OR6B1O95007 311 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 ALOX15P16050 662 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-202ENST00000367279 CCL15Q16663 113 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 MAML3Q96JK9 1138 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 WDR41Q9HAD4 459 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 WDR6Q9NNW5 1121 aaKnown RBP12.52□□□□□ -0.41
PTPN7-202ENST00000367279 SLC2A6Q9UGQ3 507 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
PTPN7-202ENST00000367279 TRIP12Q14669 1992 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 FAM95CA0A1B0GW59 222 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 MATN2O00339 956 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 WARSP23381 471 aaKnown RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 PRKAA1Q13131 559 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 SLC12A1Q13621 1099 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 CSHL1Q14406 222 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 MFSD10Q14728 455 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 RARS2Q5T160 578 aaKnown RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 FAM219BQ5XKK7 198 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 LRRC8EQ6NSJ5 796 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 FBXL19Q6PCT2 694 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ZYG11AQ6WRX3 759 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 GPR142Q7Z601 462 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ZC3HC1Q86WB0 502 aaKnown RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 EXT2Q93063 718 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TMEM30AQ9NV96 361 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 NCAM2O15394 837 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 STMN1P16949 149 aa12.51□□□□□ -0.41
PTPN7-202ENST00000367279 TSPAN8P19075 237 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms