RNA–Protein interactions for RNA: ENST00000366794.9

PARP1-203, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP1, Length 3,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-203ENST00000366794 SMNDC1O75940 238 aaKnown RBP eCLIP14.39□□□□□ -0.11
PARP1-203ENST00000366794 GRK2P25098 689 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 CYLC2Q14093 348 aaPredicted RBP14.39□□□□□ -0.11
PARP1-203ENST00000366794 ACSBG2Q5FVE4 666 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 GRTP1Q5TC63 336 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 ULK2Q8IYT8 1036 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 ST13P4Q8IZP2 240 aaPredicted RBP14.39□□□□□ -0.11
PARP1-203ENST00000366794 PLD6Q8N2A8 252 aaKnown RBP14.39□□□□□ -0.11
PARP1-203ENST00000366794 CEP70Q8NHQ1 597 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 ZC3H15Q8WU90 426 aaKnown RBP14.39□□□□□ -0.11
PARP1-203ENST00000366794 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 SIGLEC10Q96LC7 697 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 SMOQ99835 787 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
PARP1-203ENST00000366794 FZD10Q9ULW2 581 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 BTRCQ9Y297 605 aa14.39□□□□□ -0.11
PARP1-203ENST00000366794 H0Y626 953 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 STX7O15400 261 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 AXLP30530 894 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 NRF1Q16656 503 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 PFKFB4Q16877 469 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 SPANXN3Q5MJ09 141 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 GDF6Q6KF10 455 aaPredicted RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 CGB2Q6NT52 195 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 RCN3Q96D15 328 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 OXCT2Q9BYC2 517 aaPredicted RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 RGS18Q9NS28 235 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 KCNH4Q9UQ05 1017 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 CENPFP49454 3210 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 ANGPT2O15123 496 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 PLIN3O60664 434 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 HARS2P49590 506 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 DPYSL2Q16555 572 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 NPAS2Q99743 824 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 CINPQ9BW66 212 aaPredicted RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 Q9H521 79 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 SEMA4BQ9NPR2 832 aaPredicted RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 GMIPQ9P107 970 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 TRIM16O95361 564 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 CHEK2O96017 543 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 YWHAQP27348 245 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 PTPN9P43378 593 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 KYAT3Q6YP21 454 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 MIER2Q8N344 545 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 HNRNPABQ99729 332 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 GATA5Q9BWX5 397 aaPredicted RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 LRMDAQ9H2I8 198 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 SPATS2LQ9NUQ6 558 aaKnown RBP14.38□□□□□ -0.11
PARP1-203ENST00000366794 NMRK1Q9NWW6 199 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 NCKIPSDQ9NZQ3 722 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 COL4A5P29400 1685 aa14.38□□□□□ -0.11
PARP1-203ENST00000366794 HACD1B0YJ81 288 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 F5H5T6 163 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ARL13AQ5H913 290 aaPredicted RBP14.37□□□□□ -0.11
PARP1-203ENST00000366794 PPP1R15BQ5SWA1 713 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 LINGO4Q6UY18 593 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CCNJLQ8IV13 435 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 UPF1Q92900 1129 aaKnown RBP eCLIP14.37□□□□□ -0.11
PARP1-203ENST00000366794 THEGQ9P2T0 379 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 COPG2Q9UBF2 871 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CDH9Q9ULB4 789 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 SLC30A1Q9Y6M5 507 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 PFDN6O15212 129 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ALDH2P05091 517 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CKMP06732 381 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 TFEBP19484 476 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 TAF10Q12962 218 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 DDX39BQ13838 428 aaKnown RBP14.37□□□□□ -0.11
PARP1-203ENST00000366794 PTK2BQ14289 1009 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ZBTB46Q86UZ6 589 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CACUL1Q86Y37 369 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 TREML1Q86YW5 311 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ATP6V0D2Q8N8Y2 350 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 FBXO27Q8NI29 283 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 ARHGEF3Q9NR81 526 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 GSTA4O15217 222 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 HNRNPCL1O60812 293 aaKnown RBP14.37□□□□□ -0.11
PARP1-203ENST00000366794 PFKMP08237 780 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 GCAP28676 217 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 TCEAL1Q15170 157 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 MAPRE1Q15691 268 aaKnown RBP14.37□□□□□ -0.11
PARP1-203ENST00000366794 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 AGAP9Q5VTM2 703 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CLEC6AQ6EIG7 209 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 TDRPQ86YL5 185 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 RSPH1Q8WYR4 309 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 INPP5DQ92835 1189 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 CAAP1Q9H8G2 361 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 MID1IP1Q9NPA3 183 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 SAR1AQ9NR31 198 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 DTNAQ9Y4J8 743 aa14.37□□□□□ -0.11
PARP1-203ENST00000366794 UBR3Q6ZT12 1888 aa14.36□□□□□ -0.11
PARP1-203ENST00000366794 CACNA2D1P54289 1103 aa14.36□□□□□ -0.11
PARP1-203ENST00000366794 SLC20A2Q08357 652 aa14.36□□□□□ -0.11
PARP1-203ENST00000366794 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
PARP1-203ENST00000366794 NAIF1Q69YI7 327 aaPredicted RBP14.36□□□□□ -0.11
PARP1-203ENST00000366794 LRRC8BQ6P9F7 803 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms