RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 RFX2P48378 723 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 PMS2P54278 862 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 GOLGA8FQ08AF8 430 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 SLC12A1Q13621 1099 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 EFR3AQ14156 821 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 GPR18Q14330 331 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 DCAF12L2Q5VW00 463 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 GJB7Q6PEY0 223 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZNF517Q6ZMY9 492 aaPredicted RBP3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZDHHC17Q8IUH5 632 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 B4GALNT2Q8NHY0 566 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 OIT3Q8WWZ8 545 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 STAMQ92783 540 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 APOLD1Q96LR9 279 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZSCAN31Q96LW9 406 aaPredicted RBP3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 CLSTN3Q9BQT9 956 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 PLAC1Q9HBJ0 212 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 KRCC1Q9NPI7 259 aaPredicted RBP3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 GRHL1Q9NZI5 618 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 NCKIPSDQ9NZQ3 722 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 SEL1LQ9UBV2 794 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 DGKBQ9Y6T7 804 aa3.44□□□□□ -1.86
RNU4-48P-201ENST00000365559 A0A1B0GVT2 93 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A7PA6NKC0 464 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A22PA8MWA6 464 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A12PA8MX19 464 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A23PA8MXZ1 464 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 EIF3FO00303 357 aaPredicted RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 PEX12O00623 359 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ANP32CO43423 234 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 SMAD6O43541 496 aaKnown RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 HBP1O60381 514 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 CLDN7O95471 211 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 WEE2P0C1S8 567 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ARSBP15848 533 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 CDKN2AP42771 156 aaKnown RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 THBS3P49746 956 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 PGGT1BP53609 377 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 MAPK7Q13164 816 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 RAPGEF1Q13905 1077 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 DHX8Q14562 1220 aaKnown RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ANKRD1Q15327 319 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 RPE65Q16518 533 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ME3Q16798 604 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 HEPHL1Q6MZM0 1159 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 LVRNQ6Q4G3 990 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 Q6ZSV7 163 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 SERPINA11Q86U17 422 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ANKRD18AQ8IVF6 992 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 CPOQ8IVL8 374 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZDHHC23Q8IYP9 409 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 CADM3Q8N126 398 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 TRIM63Q969Q1 353 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 REEP2Q9BRK0 252 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 NPLQ9BXD5 320 aaPredicted RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 LMAN2LQ9H0V9 348 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 TTC12Q9H892 705 aaPredicted RBP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 RIC8AQ9NPQ8 531 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 ATP8A2Q9NTI2 1148 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 GDAQ9Y2T3 454 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 PTGDR2Q9Y5Y4 395 aa3.43□□□□□ -1.86
RNU4-48P-201ENST00000365559 C17orf102A2RUQ5 167 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A8PA6NJQ4 464 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 INAFM1C9JVW0 142 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 TPD52L2O43399 206 aaKnown RBP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 RGS14O43566 566 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 LDB2O43679 373 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ADAP00813 363 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 IL1AP01583 271 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A13PP0C7W8 464 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 FAM90A24PP0C7X0 464 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 MYZAPP0CAP1 466 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 CDC25AP30304 524 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 RFC1P35251 1148 aaPredicted RBP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 THPOP40225 353 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ENTPD1P49961 510 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 CCR5P51681 352 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 CDH12P55289 794 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZP1P60852 638 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 GPS2Q13227 327 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 SLC18A3Q16572 532 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 UBAP2Q5T6F2 1119 aaKnown RBP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 MAP3K21Q5TCX8 1036 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 TRILQ7L0X0 811 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZNF367Q7RTV3 350 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 PRR26Q8N8Z3 221 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 USP38Q8NB14 1042 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 OR4N2Q8NGD1 307 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 BICD2Q8TD16 824 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 HERVK_113Q902F9 699 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ATOH1Q92858 354 aaPredicted RBP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 GCC1Q96CN9 775 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 NAF1Q96HR8 494 aaKnown RBP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 ZNF333Q96JL9 665 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 SCLT1Q96NL6 688 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 LHPPQ9H008 270 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 MROH8Q9H579 483 aa3.42□□□□□ -1.86
RNU4-48P-201ENST00000365559 CATSPERBQ9H7T0 1116 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms