RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 TRABD2AQ86V40 505 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM200AQ86VY9 491 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 PGBD5Q8N414 524 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 FAM156AQ8NDB6 213 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 RFWD2Q8NHY2 731 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 FAM110DQ8TAY7 271 aaPredicted RBP2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 LGALS12Q96DT0 336 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 MTBPQ96DY7 904 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 LRRC46Q96FV0 321 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 F2RL3Q96RI0 385 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 DDX43Q9NXZ2 648 aaKnown RBP2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 LRFN1Q9P244 771 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 MYO1AQ9UBC5 1043 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 DTNAQ9Y4J8 743 aa2.25□□□□□ -2.05
RNU6-238P-201ENST00000363313 HNRNPCL2B2RXH8 293 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 CETPP11597 493 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 FGFR2P21802 821 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 LIFRP42702 1097 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 CLCNKBP51801 687 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 ZBTB16Q05516 673 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 TYW3Q6IPR3 259 aaKnown RBP2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 FAM122CQ6P4D5 195 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 DGKHQ86XP1 1220 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 EPHX4Q8IUS5 362 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM217Q8N7C4 229 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 WDR60Q8WVS4 1066 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM18Q96B42 140 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 ZNF501Q96CX3 271 aaPredicted RBP2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 OR1F2PQ96R84 312 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 GDF15Q99988 308 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 DDX23Q9BUQ8 820 aaKnown RBP2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM160Q9NX00 188 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 ARL15Q9NXU5 204 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 SLC12A4Q9UP95 1085 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 OSGIN2Q9Y236 505 aa2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 COPG1Q9Y678 874 aaKnown RBP2.24□□□□□ -2.05
RNU6-238P-201ENST00000363313 A6NNZ2 444 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 J3KTA2 159 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 CH25HO95992 272 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 SLC5A1P13866 664 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 PECAM1P16284 738 aaPredicted RBP2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 CD53P19397 219 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 KCNA5P22460 613 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 GRIK2Q13002 908 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 SEMA5AQ13591 1074 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 ARL13AQ5H913 290 aaPredicted RBP2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 SLC30A9Q6PML9 568 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 SLC26A9Q7LBE3 791 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 METTL27Q8N6F8 245 aaPredicted RBP2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 FAR1Q8WVX9 515 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 REXO5Q96IC2 774 aaKnown RBP2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 LITAFQ99732 161 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 EGFL8Q99944 293 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 Q9N2J8 555 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 FSCN3Q9NQT6 498 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 PAM16Q9Y3D7 125 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 RNF215Q9Y6U7 377 aa2.23□□□□□ -2.05
RNU6-238P-201ENST00000363313 CGNL1Q0VF96 1302 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3DA0A087WVF3 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3IA0A087WXS9 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3EA0A087X179 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3KA0A087X1G2 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3BA6NDS4 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3FA6NER0 549 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 MBD3L5A6NJ08 208 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 KDM4EB2RXH2 506 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3LB9A6J9 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TPP1O14773 563 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TIPRLO75663 272 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 CLDN7O95471 211 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3HP0C7X1 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 RFC1P35251 1148 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 RPL3P39023 403 aaKnown RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 CSRP3P50461 194 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 LUMP51884 338 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMPRSS3P57727 454 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 LPAL2Q16609 132 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 ARHGAP29Q52LW3 1261 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 ARHGAP15Q53QZ3 475 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 FAM69BQ5VUD6 431 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM268Q5VZI3 342 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 ARL6IP4Q66PJ3 421 aaKnown RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 ANKRD40Q6AI12 368 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3GQ6DHY5 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 NXNQ6DKJ4 435 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 SPINK14Q6IE38 97 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3CQ6IPX1 549 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 SUSD1Q6UWL2 747 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 NFE4Q86UQ8 179 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TBC1D3Q8IZP1 549 aaPredicted RBP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 KCNH5Q8NCM2 988 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 C17orf77Q96MU5 243 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 LRFN5Q96NI6 719 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 ASCL2Q99929 193 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 TMEM120AQ9BXJ8 343 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 UBXN6Q9BZV1 441 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 SLC52A1Q9NWF4 448 aa2.22□□□□□ -2.05
RNU6-238P-201ENST00000363313 RGL1Q9NZL6 768 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms