RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZNF211Q13398 564 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 ELAVL3Q14576 367 aaKnown RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 ACCSLQ4AC99 568 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 RALGPS1Q5JS13 557 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 CCDC181Q5TID7 509 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 LINGO4Q6UY18 593 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 DSG4Q86SJ6 1040 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 CCDC33Q8N5R6 958 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 MAML1Q92585 1016 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 PTPRN2Q92932 1015 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 HAUS1Q96CS2 278 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 NAPGQ99747 312 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 FERMT1Q9BQL6 677 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 FAM126AQ9BYI3 521 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 CD248Q9HCU0 757 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 SPATA6Q9NWH7 488 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 SEPT3Q9UH03 358 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
NSMCE1-201ENST00000361439 MUC22E2RYF6 1773 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 MYO18AQ92614 2054 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 FAM86C2PA6NEL3 165 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 WASH3PC4AMC7 463 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ENC1O14682 589 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 MCF2LO15068 1137 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 RNASEH1O60930 286 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF821O75541 412 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 TMCC1O94876 653 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 APBB3O95704 486 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 PEX11BO96011 259 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ATP1A1P05023 1023 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 CES1P23141 567 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 MAPK8P45983 427 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 RECQLP46063 649 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 CSNK1DP48730 415 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 DNA2P51530 1060 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 NRLP54845 237 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 SNRPD1P62314 119 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 SFSWAPQ12872 951 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 LBRQ14739 615 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 GRM3Q14832 879 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 NOMO1Q15155 1222 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ZNF528Q3MIS6 628 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 C9orf64Q5T6V5 341 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 MARC1Q5VT66 337 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 PAPD7Q5XG87 772 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 C22orf39Q6P5X5 142 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 PKN3Q6P5Z2 889 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ARHGAP36Q6ZRI8 547 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 SLC13A5Q86YT5 568 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 TP53INP2Q8IXH6 220 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 CCDC13Q8IYE1 715 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 RASGEF1CQ8N431 466 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 TEX26Q8N6G2 289 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 CCNYQ8ND76 341 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 TSTD1Q8NFU3 115 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 OR2T3Q8NH03 318 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 TFB1MQ8WVM0 346 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 LRIG1Q96JA1 1093 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 PSKH2Q96QS6 385 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 VAT1Q99536 393 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 LRFN3Q9BTN0 628 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 HOMER3Q9NSC5 361 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 SNX12Q9UMY4 172 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 SCML1Q9UN30 329 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 NUP205Q92621 2012 aa14.07□□□□□ -0.16
NSMCE1-201ENST00000361439 ANTXRLA6NF34 631 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 SMAD6O43541 496 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 HLA-EP13747 358 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 CCNB1P14635 433 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 IFI35P80217 286 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 SATB1Q01826 763 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 RAD51Q06609 339 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 PRKD1Q15139 912 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 CYTH1Q15438 398 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 CARD16Q5EG05 197 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 AADACL2Q6P093 401 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 NYAP1Q6ZVC0 841 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 RASSF3Q86WH2 238 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 TMIEQ8NEW7 156 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 OR2AP1Q8NGE2 309 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 OR2A12Q8NGT7 310 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 OR8D1Q8WZ84 308 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 GDAP1L1Q96MZ0 367 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 WDR24Q96S15 920 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 OSBPL9Q96SU4 736 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 LGMNQ99538 433 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 CINPQ9BW66 212 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 RSPH9Q9H1X1 276 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 KCNH6Q9H252 994 aa14.06□□□□□ -0.16
NSMCE1-201ENST00000361439 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 K7ERQ8 282 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 K7ESF4 209 aa14.05□□□□□ -0.16
NSMCE1-201ENST00000361439 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms