RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 RPL10P27635 214 aaKnown RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 PKNOX1P55347 436 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 MYBPC1Q00872 1141 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 ZBTB17Q13105 803 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 DPYSQ14117 519 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 FAM110CQ1W6H9 321 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 CERCAMQ5T4B2 595 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 AAGABQ6PD74 315 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 WDR75Q8IWA0 830 aaKnown RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 TRIML2Q8N7C3 387 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 USP33Q8TEY7 942 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 MFSD3Q96ES6 412 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 TNIP3Q96KP6 325 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 TMEM216Q9P0N5 145 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 KLHL8Q9P2G9 620 aaPredicted RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 ZFXP17010 805 aaPredicted RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 ACADSBP45954 432 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 EMP3P54852 163 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 XKR4Q5GH76 650 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 SPRYD7Q5W111 196 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 C10orf107Q8IVU9 208 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 ATP2A3Q93084 1043 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 LRRC39Q96DD0 335 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 ZNF512Q96ME7 567 aaPredicted RBP16.46■□□□□ 0.23
IFT140-201ENST00000361339 ZDHHC7Q9NXF8 308 aa16.46■□□□□ 0.23
IFT140-201ENST00000361339 DCLK1O15075 740 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 CELF2O95319 508 aaKnown RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 CRHR1P34998 444 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 NOS2P35228 1153 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 PGFP49763 221 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 IRF9Q00978 393 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 ANKDD1AQ495B1 522 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 KYAT3Q6YP21 454 aaKnown RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 ARHGAP36Q6ZRI8 547 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 UPF1Q92900 1129 aaKnown RBP eCLIP16.45■□□□□ 0.22
IFT140-201ENST00000361339 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 TMEM209Q96SK2 561 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 SENP6Q9GZR1 1112 aaPredicted RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 DDIT4Q9NX09 232 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 NUDT5Q9UKK9 219 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 PAIP2BQ9ULR5 123 aaKnown RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 TTC3P53804 2025 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 GOLGA8QA0A0J9YX86 632 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 GOLGA8OA6NCC3 632 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 GOLGA8NF8WBI6 632 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 WARSP23381 471 aaKnown RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 PTPN3P26045 913 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 CD68P34810 354 aaPredicted RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 ADRA1BP35368 520 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 SERPINB5P36952 375 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 SCNN1GP51170 649 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 SH3BGRP55822 239 aaPredicted RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 NAA20P61599 178 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 HSP90AA5PQ58FG0 334 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 LGSNQ5TDP6 509 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 ITPRIPL1Q6GPH6 555 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 MAVSQ7Z434 540 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 CPNE9Q8IYJ1 553 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 PNPLA1Q8N8W4 532 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 FRMD8Q9BZ67 464 aaPredicted RBP16.45■□□□□ 0.22
IFT140-201ENST00000361339 SEMA6AQ9H2E6 1030 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
IFT140-201ENST00000361339 FGF3P11487 239 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 ITGAXP20702 1163 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 FGFR3P22607 806 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 SNX16P57768 344 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 CDKL1Q00532 357 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 FAM35AQ86V20 835 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 ZNF669Q96BR6 464 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 C7orf26Q96N11 449 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 UNKQ9C0B0 810 aaKnown RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 NDUFA13Q9P0J0 144 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 GMEB1Q9Y692 573 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 H3BNX3 289 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 HAS3O00219 553 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 SNNO75324 88 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 VARSP26640 1264 aaKnown RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 ENTPD1P49961 510 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 PCLAFQ15004 111 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 STEAP4Q687X5 459 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 MBLAC2Q68D91 279 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 BNIPLQ7Z465 357 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 FAM156AQ8NDB6 213 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 ZSCAN18Q8TBC5 510 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 ZNF419Q96HQ0 510 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 PARK7Q99497 189 aaKnown RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 MLPHQ9BV36 600 aaPredicted RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 CAAP1Q9H8G2 361 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 PDCD11Q14690 1871 aaKnown RBP16.44■□□□□ 0.22
IFT140-201ENST00000361339 C17orf102A2RUQ5 167 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 KLF11O14901 512 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 ALDH1A2O94788 518 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 DAOAP59103 153 aa16.44■□□□□ 0.22
IFT140-201ENST00000361339 SFSWAPQ12872 951 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms