RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 GTF3C4Q9UKN8 822 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GPC6Q9Y625 555 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 H0YJX3 145 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 PRODHO43272 600 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 COX7A2P14406 83 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RPA3P35244 121 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GALNT6Q8NCL4 622 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 NKX2-3Q8TAU0 364 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GIN1Q9NXP7 522 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF214Q9UL59 606 aaPredicted RBP13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 TRIM17Q9Y577 477 aa13.38□□□□□ -0.27
SRGAP3-201ENST00000360413 GP5P40197 560 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TOMM20Q15388 145 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 FAM187BQ17R55 369 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 POTEHQ6S545 545 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 DNAJC14Q6Y2X3 702 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SP8Q8IXZ3 490 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 DDIT4Q9NX09 232 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 VANGL2Q9ULK5 521 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 ADGRL2O95490 1459 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 UMPSP11172 480 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 PCSK2P16519 638 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 LDHDQ86WU2 507 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TRPV1Q8NER1 839 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 RIT2Q99578 217 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SLC25A23Q9BV35 468 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 UNKQ9C0B0 810 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 RBM7Q9Y580 266 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 ADCY10Q96PN6 1610 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 PON1P27169 355 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 HOXC12P31275 282 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 MAPK8P45983 427 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 CDC42P60953 191 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 RABL6Q3YEC7 729 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 RETSATQ6NUM9 610 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 MAP3K14Q99558 947 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TDRD1Q9BXT4 1180 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 MARCH7Q9H992 704 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 PNPLA8Q9NP80 782 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 C21orf2O43822 256 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 PCDH8O95206 1070 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 ZC2HC1CQ53FD0 456 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TTMPQ5BVD1 217 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 GRTP1Q5TC63 336 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SYNE4Q8N205 404 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 C3orf18Q9UK00 162 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 AP4B1Q9Y6B7 739 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 COL15A1P39059 1388 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 CCNB2O95067 398 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TFRCP02786 760 aaKnown RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 PRG2P13727 222 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 CYP2A13Q16696 494 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SULT1C3Q6IMI6 304 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 COLGALT2Q8IYK4 626 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 CSGALNACT1Q8TDX6 532 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TTYH1Q9H313 450 aaPredicted RBP13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TOR3AQ9H497 397 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 TAS2R13Q9NYV9 303 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 GNPTGQ9UJJ9 305 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
SRGAP3-201ENST00000360413 IFI30P13284 250 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 NPR2P20594 1047 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 C6orf183Q5T699 404 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ZCCHC23Q6ZST2 131 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 NAT14Q8WUY8 206 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 NMRAL1Q9HBL8 299 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 DGKBQ9Y6T7 804 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 KCNH1O95259 989 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 BMT2Q1RMZ1 405 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF484Q5JVG2 852 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ARHGAP36Q6ZRI8 547 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 LZTR1Q8N653 840 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 FBXO30Q8TB52 745 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ZNF285Q96NJ3 590 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 FAIM2Q9BWQ8 316 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 GPN1Q9HCN4 374 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MID1IP1Q9NPA3 183 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 TNFSF13BQ9Y275 285 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 ZSCAN5CA6NGD5 496 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 PDE2AO00408 941 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CSH1P0DML2 217 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CSH2P0DML3 217 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MBL2P11226 248 aaPredicted RBP13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MYL9P24844 172 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 CDK7P50613 346 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 GTF2A2P52657 109 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 MYL6P60660 151 aa13.36□□□□□ -0.27
SRGAP3-201ENST00000360413 IQCF2Q8IXL9 164 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms