RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SV2AQ7L0J3 742 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 PCDHA11Q9Y5I1 949 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 PDHA2P29803 388 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 CEBPGP53567 150 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 TIMM50Q3ZCQ8 353 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 MIIPQ5JXC2 388 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 TTC27Q6P3X3 843 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 AMIGO2Q86SJ2 522 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 TRAPPC5Q8IUR0 188 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 FUKQ8N0W3 1084 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 MED14O60244 1454 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 TFECO14948 347 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 COX4I1P13073 169 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SELENOMQ8WWX9 145 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 DNAJC1Q96KC8 554 aaKnown RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 BARX2Q9UMQ3 279 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 EME2A4GXA9 379 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 MGRN1O60291 552 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 CST1P01037 141 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SFSWAPQ12872 951 aaKnown RBP16.23■□□□□ 0.19
COL18A1-203ENST00000359759 Q4G0T1 1027 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 CAMK1DQ8IU85 385 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 ZHX1-C8orf76Q96EF9 292 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 DNAJC18Q9H819 358 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 KCNK4Q9NYG8 393 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 SPG21Q9NZD8 308 aa16.23■□□□□ 0.19
COL18A1-203ENST00000359759 OVOS2A0A0G2JMS6 1433 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 IFNA16P05015 189 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 PSMB4P28070 264 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 KPNA1P52294 538 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 C1QBPQ07021 282 aaKnown RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 AENQ8WTP8 325 aaKnown RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 TKTL2Q9H0I9 626 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ETNK2Q9NVF9 386 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ITGA11Q9UKX5 1188 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 KCNJ2P63252 427 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 CBFBQ13951 182 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 SETMARQ53H47 684 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 DENND5AQ6IQ26 1287 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 CAB39LQ9H9S4 337 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 PPP2R3BQ9Y5P8 575 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 TMEM150BA6NC51 233 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 PIAS1O75925 651 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 OR5F1O95221 314 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 SRSF11Q05519 484 aaKnown RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 TNK2Q07912 1038 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 MED22Q15528 200 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF280DQ6N043 979 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ALYREFQ86V81 257 aaKnown RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 MYDGFQ969H8 173 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 CITED4Q96RK1 184 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 OMDQ99983 421 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 RWDD3Q9Y3V2 267 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 GMFGO60234 142 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 MTA2O94776 668 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 SP100P23497 879 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 FCGRTP55899 365 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ACSM2AQ08AH3 577 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ACSM2BQ68CK6 577 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 DEFB106AQ8N104 65 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 GPR156Q8NFN8 814 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 OR52K1Q8NGK4 314 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF606Q8WXB4 792 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 SETD4Q9NVD3 440 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 NOS1APO75052 506 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 BCL2L1Q07817 233 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 AGMOQ6ZNB7 445 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 TPGS1Q6ZTW0 290 aa16.22■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF483Q8TF39 744 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-203ENST00000359759 FSBPO95073 299 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 MYL9P24844 172 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 FOLH1Q04609 750 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 XRRA1Q6P2D8 792 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 TMEM51Q9NW97 253 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 COPZ1P61923 177 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 VPS72Q15906 364 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 FBXO42Q6P3S6 717 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 KLHL32Q96NJ5 620 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 EURLQ9NYK6 297 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 RBM7Q9Y580 266 aaKnown RBP16.21■□□□□ 0.19
COL18A1-203ENST00000359759 CCDC166P0CW27 439 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 HNF4AP41235 474 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 ACLYP53396 1101 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 DNAJB3Q8WWF6 145 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 RNPEPL1Q9HAU8 725 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 ZNF232Q9UNY5 417 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 ENTPD5O75356 428 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 KRT33AO76009 404 aa16.21■□□□□ 0.19
COL18A1-203ENST00000359759 FARP2O94887 1054 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-203ENST00000359759 LRATO95237 230 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms