RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PFDN6O15212 129 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 DNAJA2O60884 412 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 VTNP04004 478 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CNTFP26441 200 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PIK3R1P27986 724 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 L1CAMP32004 1257 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 NAGLUP54802 743 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 GRM1Q13255 1194 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SNAPC2Q13487 334 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 E2F2Q14209 437 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 IL31Q6EBC2 164 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SULF1Q8IWU6 871 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TTC39CQ8N584 583 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SNX31Q8N9S9 440 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 KYQ8NBH2 561 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SLC43A3Q8NBI5 491 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FLAD1Q8NFF5 587 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MFSD3Q96ES6 412 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CERS2Q96G23 380 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 P2RY11Q96G91 374 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PLEKHA8Q96JA3 519 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPATA33Q96N06 139 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 HAUS8Q9BT25 410 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CDH19Q9H159 772 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 C2orf40Q9H1Z8 148 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 EHD1Q9H4M9 534 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 DNAJC28Q9NX36 388 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MKS1Q9NXB0 559 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 QPCTLQ9NXS2 382 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PSMD13Q9UNM6 376 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 COL11A2P13942 1736 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 A0A0A0MRY4 1105 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MFSD11O43934 449 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 GCATO75600 419 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ESRRBO95718 433 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FAM58BPP0C7Q3 252 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CCDC130P13994 396 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 POLR2EP19388 210 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TPSB2P20231 275 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 GP5P40197 560 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 LRP8Q14114 963 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TPSAB1Q15661 275 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PUS10Q3MIT2 529 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 IL23RQ5VWK5 629 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FSTL4Q6MZW2 842 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 RWDD4Q6NW29 188 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PCDH20Q8N6Y1 951 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 AGBL3Q8NEM8 1001 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 REPS2Q8NFH8 660 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PPWD1Q96BP3 646 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 RTP4Q96DX8 246 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPATA13Q96N96 652 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 NPAS2Q99743 824 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MRPL45Q9BRJ2 306 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ILKAPQ9H0C8 392 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 GBA2Q9HCG7 927 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 DPP3Q9NY33 737 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ANKRD34BA5PLL1 514 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TMEM114B3SHH9 223 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 IL18RAPO95256 599 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ARIH2O95376 493 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MT-CO1P00395 513 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ATP5BP06576 529 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PFKMP08237 780 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PGAM1P18669 254 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TCEA1P23193 301 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MAGEA3P43357 314 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MYBPC1Q00872 1141 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 MS4A2Q01362 244 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CD300CQ08708 224 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SEMA5AQ13591 1074 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 APOFQ13790 326 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PHKG1Q16816 387 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 LSM12Q3MHD2 195 aaKnown RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SEL1L3Q68CR1 1132 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 LCLAT1Q6UWP7 414 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 LAYNQ6UX15 382 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 SPNS2Q8IVW8 549 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 LZTR1Q8N653 840 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ACVR1CQ8NER5 493 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ACMSDQ8TDX5 336 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 ERLEC1Q96DZ1 483 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 THAP11Q96EK4 314 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 TSNARE1Q96NA8 513 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 PKP2Q99959 881 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FERMT1Q9BQL6 677 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 GATA5Q9BWX5 397 aaPredicted RBP8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 DPEP3Q9H4B8 488 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 FAM96AQ9H5X1 160 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 CAAP1Q9H8G2 361 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 NMRAL1Q9HBL8 299 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 HOXC10Q9NYD6 342 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 IGSF9Q9P2J2 1179 aa8.37□□□□□ -1.07
CDC42SE1-201ENST00000357235 A0A1W2PQ67 120 aa8.36□□□□□ -1.07
CDC42SE1-201ENST00000357235 KPNA7A9QM74 516 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms