RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 FAM126AQ9BYI3 521 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 PRMT8Q9NR22 394 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 SPATA6Q9NWH7 488 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 FBXO4Q9UKT5 387 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 MFHAS1Q9Y4C4 1052 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 CCDC163A0A0D9SF12 145 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 CTAGE9A4FU28 777 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 KIF2AO00139 706 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 LAMTOR5O43504 91 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 GSRP00390 522 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 GLDCP23378 1020 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 PRKCHP24723 683 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 MAPK8P45983 427 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 STK19P49842 368 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 ETF1P62495 437 aaKnown RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 ZBTB16Q05516 673 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 SFSWAPQ12872 951 aaKnown RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 RALGPS1Q5JS13 557 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 CCDC33Q8N5R6 958 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 LRIG1Q96JA1 1093 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 PSKH2Q96QS6 385 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 NAPGQ99747 312 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 HEMGNQ9BXL5 484 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 HOMER3Q9NSC5 361 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 SEPT3Q9UH03 358 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 TTC7AQ9ULT0 858 aaPredicted RBP16.29■□□□□ 0.2
FDPS-201ENST00000356657 SNX12Q9UMY4 172 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 SCML1Q9UN30 329 aa16.29■□□□□ 0.2
FDPS-201ENST00000356657 A0A1W2PQF6 199 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 MCF2LO15068 1137 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 MATN3O15232 486 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 RNASEH1O60930 286 aaKnown RBP16.28■□□□□ 0.2
FDPS-201ENST00000356657 TMCC1O94876 653 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 APBB3O95704 486 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 CD160O95971 181 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 NRLP54845 237 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 SNRPD1P62314 119 aaKnown RBP16.28■□□□□ 0.2
FDPS-201ENST00000356657 NSUN2Q08J23 767 aaKnown RBP eCLIP16.28■□□□□ 0.2
FDPS-201ENST00000356657 ZNF211Q13398 564 aaPredicted RBP16.28■□□□□ 0.2
FDPS-201ENST00000356657 GRM3Q14832 879 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 NOMO1Q15155 1222 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 ACCSLQ4AC99 568 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 LINGO4Q6UY18 593 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 SLC13A5Q86YT5 568 aaPredicted RBP16.28■□□□□ 0.2
FDPS-201ENST00000356657 CCDC13Q8IYE1 715 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 TSTD1Q8NFU3 115 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 OR2T3Q8NH03 318 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 TFB1MQ8WVM0 346 aaKnown RBP16.28■□□□□ 0.2
FDPS-201ENST00000356657 MAML1Q92585 1016 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 GDAP1L1Q96MZ0 367 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 VAT1Q99536 393 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 KCNH6Q9H252 994 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 CD248Q9HCU0 757 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 EBF1Q9UH73 591 aa16.28■□□□□ 0.2
FDPS-201ENST00000356657 TTC34A8MYJ7 566 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 J3KR12 359 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 ENC1O14682 589 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 IGSF6O95976 241 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 MT-CO1P00395 513 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 CES1P23141 567 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 CSNK1DP48730 415 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 RHOAP61586 193 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 RAD51Q06609 339 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 ADCY2Q08462 1091 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 SLC10A2Q12908 348 aaPredicted RBP16.27■□□□□ 0.19
FDPS-201ENST00000356657 ZNF235Q14590 738 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 LBRQ14739 615 aaKnown RBP16.27■□□□□ 0.19
FDPS-201ENST00000356657 ZNF528Q3MIS6 628 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 MARC1Q5VT66 337 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 PAPD7Q5XG87 772 aaKnown RBP16.27■□□□□ 0.19
FDPS-201ENST00000356657 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 RASGEF1CQ8N431 466 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 CCNYQ8ND76 341 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 OR2AP1Q8NGE2 309 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 ACTL9Q8TC94 416 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 OR8D1Q8WZ84 308 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 PTPRN2Q92932 1015 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 OSBPL9Q96SU4 736 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 CINPQ9BW66 212 aaPredicted RBP16.27■□□□□ 0.19
FDPS-201ENST00000356657 PRSS16Q9NQE7 514 aa16.27■□□□□ 0.19
FDPS-201ENST00000356657 CACNA1HO95180 2353 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 ATP1A1P05023 1023 aaKnown RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 PECAM1P16284 738 aaPredicted RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 IFI35P80217 286 aaPredicted RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 OTUD4Q01804 1114 aaKnown RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 PRKD1Q15139 912 aaPredicted RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 SLC45A4Q5BKX6 768 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 C9orf64Q5T6V5 341 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 NYAP1Q6ZVC0 841 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 RASSF3Q86WH2 238 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 TEX26Q8N6G2 289 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 QKIQ96PU8 341 aaKnown RBP eCLIP16.26■□□□□ 0.19
FDPS-201ENST00000356657 WDR24Q96S15 920 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 RSPH9Q9H1X1 276 aaPredicted RBP16.26■□□□□ 0.19
FDPS-201ENST00000356657 RNF14Q9UBS8 474 aa16.26■□□□□ 0.19
FDPS-201ENST00000356657 PLXND1Q9Y4D7 1925 aa16.25■□□□□ 0.19
FDPS-201ENST00000356657 CFAP69A5D8W1 941 aa16.25■□□□□ 0.19
FDPS-201ENST00000356657 WASH3PC4AMC7 463 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms