RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 FRG1Q14331 258 aaKnown RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 STXBP5Q5T5C0 1151 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 KYAT3Q6YP21 454 aaKnown RBP18.26■□□□□ 0.51
COL18A1-202ENST00000355480 PIGZQ86VD9 579 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 EPS8L1Q8TE68 723 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 MKL1Q969V6 931 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 SLC25A23Q9BV35 468 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 VPS45Q9NRW7 570 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 ITSN1Q15811 1721 aa18.26■□□□□ 0.51
COL18A1-202ENST00000355480 LTA4HP09960 611 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 MYL12AP19105 171 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 SP100P23497 879 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 C16orf46Q6P387 395 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 SLC41A1Q8IVJ1 513 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CDT1Q9H211 546 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 PSME2Q9UL46 239 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 UQCRBP14927 111 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ATP12AP54707 1039 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 COPZ1P61923 177 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 NKAPQ8N5F7 415 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 BTBD10Q9BSF8 475 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 FBXO6Q9NRD1 293 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 AASDHPPTQ9NRN7 309 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CRADDP78560 199 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 IFI35P80217 286 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 COX10Q12887 443 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 C11orf88Q6PI97 169 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 SNRNP27Q8WVK2 155 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 UBE2E3Q969T4 207 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ACO2Q99798 780 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 KCNMB3Q9NPA1 279 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 IL1BP01584 269 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ANXA6P08133 673 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CCNB1P14635 433 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 KRT73Q86Y46 540 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ZNF75CPQ92670 426 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 SPRTNQ9H040 489 aaPredicted RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 PAIP2BQ9ULR5 123 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 A0A0B4J269 797 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CHADO15335 359 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 FKTNO75072 461 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 FAM58BPP0C7Q3 252 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CXCR2P25025 360 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CRATP43155 626 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 PCBP1Q15365 356 aaKnown RBP eCLIP18.25■□□□□ 0.512e-7■■■□□ 15
COL18A1-202ENST00000355480 TSNQ15631 228 aaKnown RBP18.25■□□□□ 0.51
COL18A1-202ENST00000355480 PLEKHA7Q6IQ23 1121 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 SVOPQ8N4V2 548 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 FAM45AQ8TCE6 357 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CLIP3Q96DZ5 547 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ARMCX1Q9P291 453 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 ST3GAL5Q9UNP4 418 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 TSC22D4Q9Y3Q8 395 aa18.25■□□□□ 0.51
COL18A1-202ENST00000355480 CASP5P51878 434 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 GTF2BQ00403 316 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 TAF13Q15543 124 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ZNHIT3Q15649 155 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 SNX6Q9UNH7 406 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 UBIAD1Q9Y5Z9 338 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 C15orf38-AP3S2A0A0A6YYH1 394 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 FAM153BP0C7A2 387 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 H2AFXP16104 143 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ME2P23368 584 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 TNFSF9P41273 254 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 RPL14P50914 215 aaKnown RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 CAPSQ13938 189 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 FAM153CQ494X1 144 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ARPINQ7Z6K5 226 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 MOSPD2Q8NHP6 518 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 CDRT15Q96T59 188 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 SNRNP25Q9BV90 132 aaKnown RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 CLOCKO15516 846 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 SGTAO43765 313 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 FAM187BQ17R55 369 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 PLPPR4Q7Z2D5 763 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 EFCAB3Q8N7B9 438 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 GDPD5Q8WTR4 605 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ATL1Q8WXF7 558 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 CCDC166P0CW27 439 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ZNF844Q08AG5 666 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 RSBN1Q5VWQ0 802 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 SETD9Q8NE22 299 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ZSCAN18Q8TBC5 510 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ACP6Q9NPH0 428 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ATAD3AQ9NVI7 634 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 TAS2R14Q9NYV8 317 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 PXDNQ92626 1479 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 MYL12BO14950 172 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 KCNH1O95259 989 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 PSMD5Q16401 504 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 SDHAF4Q5VUM1 108 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 AFTPHQ6ULP2 937 aa18.24■□□□□ 0.51
COL18A1-202ENST00000355480 IFNLR1Q8IU57 520 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 HJURPQ8NCD3 748 aaPredicted RBP18.24■□□□□ 0.51
COL18A1-202ENST00000355480 ARHGEF3Q9NR81 526 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms