RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 SSU72Q9NP77 194 aaKnown RBP12.5□□□□□ -0.41
COLCA1-201ENST00000355430 SYBUQ9NX95 663 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CDH9Q9ULB4 789 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PTCH2Q9Y6C5 1203 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 VAPBO95292 243 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 TCF4P15884 667 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PSEN1P49768 467 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ADCK1Q86TW2 530 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 BANPQ8N9N5 519 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 LGMNQ99538 433 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ZCWPW1Q9H0M4 648 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 EBF2Q9HAK2 575 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 MRPS17Q9Y2R5 130 aaKnown RBP12.5□□□□□ -0.41
COLCA1-201ENST00000355430 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CCNB1P14635 433 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 GOT1P17174 413 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 NFYCQ13952 458 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ZRANB3Q5FWF4 1079 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF670Q9BS34 389 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PCDH18Q9HCL0 1135 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CLIC5Q9NZA1 410 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CCDC167Q9P0B6 97 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF229Q9UJW7 825 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 COQ4Q9Y3A0 265 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ABLIM1O14639 778 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PEX1O43933 1283 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 TGDSO95455 350 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 SERPIND1P05546 499 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CD151P48509 253 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PACS1Q6VY07 963 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 NPAS4Q8IUM7 802 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF516Q92618 1163 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 RMND5BQ96G75 393 aaPredicted RBP12.5□□□□□ -0.41
COLCA1-201ENST00000355430 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 CROTQ9UKG9 612 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 RIPK3Q9Y572 518 aa12.5□□□□□ -0.41
COLCA1-201ENST00000355430 EME2A4GXA9 379 aaPredicted RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 RBP1P09455 135 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 BDNFP23560 247 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 USP4Q13107 963 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 TUSC3Q13454 348 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 EMC10Q5UCC4 262 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 SLC41A1Q8IVJ1 513 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF333Q96JL9 665 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ASPSCR1Q9BZE9 553 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 LHX5Q9H2C1 402 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PIF1Q9H611 641 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 RNF112Q9ULX5 631 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 Q9Y3F1 56 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 TM7SF2O76062 418 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 VNN1O95497 513 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 HDCP19113 662 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 INPP1P49441 399 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 FOLH1Q04609 750 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 GALNTL6Q49A17 601 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 FBXO46Q6PJ61 603 aaPredicted RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 DHFR2Q86XF0 187 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 SMG7Q92540 1137 aaKnown RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF570Q96NI8 536 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 BRD9Q9H8M2 597 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 S100A14Q9HCY8 104 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PADI3Q9ULW8 664 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 AP4S1Q9Y587 144 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 WASF2Q9Y6W5 498 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 MRASO14807 208 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 DARSP14868 501 aaKnown RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 VEGFBP49765 207 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 AARS2Q5JTZ9 985 aaKnown RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 AAGABQ6PD74 315 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ACMSDQ8TDX5 336 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 EFR3BQ9Y2G0 817 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 MYO1GB0I1T2 1018 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PEX11AO75192 247 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PFKMP08237 780 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 CRHR1P34998 444 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 RFC2P35250 354 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PLK1P53350 603 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PRKAA2P54646 552 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ZNF470Q6ECI4 717 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 B3GNT6Q6ZMB0 384 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ANKS1BQ7Z6G8 1248 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 CMC1Q7Z7K0 106 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 PSTKQ8IV42 348 aaKnown RBP12.49□□□□□ -0.41
COLCA1-201ENST00000355430 C7orf26Q96N11 449 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 SNX15Q9NRS6 342 aa12.49□□□□□ -0.41
COLCA1-201ENST00000355430 ICAM3P32942 547 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 TTLL9Q3SXZ7 439 aa12.48□□□□□ -0.41
COLCA1-201ENST00000355430 SCARA3Q6AZY7 606 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms