RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 RAB20Q9NX57 234 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 KLF15Q9UIH9 416 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 SLC25A13Q9UJS0 675 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 ZFR2Q9UPR6 939 aaKnown RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 PCDHGA4Q9Y5G9 962 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 HS3ST3A1Q9Y663 406 aa16.26■□□□□ 0.19
DDX55-202ENST00000354291 SPTBN1Q01082 2364 aaKnown RBP16.26■□□□□ 0.19
DDX55-202ENST00000354291 POM121BA6NF01 834 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 ATP9BO43861 1147 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 GABBR2O75899 941 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 NME1P15531 152 aaKnown RBP16.25■□□□□ 0.19
DDX55-202ENST00000354291 TACR2P21452 398 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 MXI1P50539 228 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 CCDC15Q0P6D6 951 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 HIST2H2BCQ6DN03 193 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 B3GNT8Q7Z7M8 397 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 SCML4Q8N228 414 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 SPATA20Q8TB22 786 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 DQX1Q8TE96 717 aaKnown RBP16.25■□□□□ 0.19
DDX55-202ENST00000354291 IRGQQ8WZA9 623 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 ERCC4Q92889 916 aaPredicted RBP16.25■□□□□ 0.19
DDX55-202ENST00000354291 SMARCE1Q969G3 411 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 RNF34Q969K3 372 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 LIN37Q96GY3 246 aaPredicted RBP16.25■□□□□ 0.19
DDX55-202ENST00000354291 PSMG3-AS1Q96PY0 264 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 FOXP3Q9BZS1 431 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 DYRK4Q9NR20 520 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 PISDQ9UG56 409 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 TLR6Q9Y2C9 796 aa16.25■□□□□ 0.19
DDX55-202ENST00000354291 SPTY2D1-AS1A0A0U1RR47 76 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 BLACEA4D250 179 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 ALOX15BO15296 676 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SLC16A3O15427 465 aaKnown RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 PAK4O96013 591 aaPredicted RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 JMJD7P0C870 316 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 LIPCP11150 499 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 ADKP55263 362 aaKnown RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 FOXK1P85037 733 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 C1orf61Q13536 156 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 PMF1Q6P1K2 205 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 PARGQ86W56 976 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SLC35F3Q8IY50 421 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 FAM174AQ8TBP5 190 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 ZNF564Q8TBZ8 553 aaPredicted RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 NAT6Q93015 286 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SLC39A13Q96H72 371 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 PPP1R13BQ96KQ4 1090 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SERPINB11Q96P15 392 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 SLC17A9Q9BYT1 436 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 STRADBQ9C0K7 418 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 MIS12Q9H081 205 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 LRRC4CQ9HCJ2 640 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 PADI4Q9UM07 663 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 NAALADL1Q9UQQ1 740 aa16.24■□□□□ 0.19
DDX55-202ENST00000354291 FARP1Q9Y4F1 1045 aaPredicted RBP16.24■□□□□ 0.19
DDX55-202ENST00000354291 F5H5T6 163 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 TPP1O14773 563 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 APOEP02649 317 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 CTSLP07711 333 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 VDRP11473 427 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 WT1P19544 449 aaPredicted RBP16.23■□□□□ 0.19
DDX55-202ENST00000354291 PLK1P53350 603 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 EIF3IQ13347 325 aaKnown RBP16.23■□□□□ 0.19
DDX55-202ENST00000354291 STIM1Q13586 685 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 PDE1CQ14123 709 aaPredicted RBP16.23■□□□□ 0.19
DDX55-202ENST00000354291 ZC3H12AQ5D1E8 599 aaKnown RBP16.23■□□□□ 0.19
DDX55-202ENST00000354291 TCERG1LQ5VWI1 586 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 ANKRD40Q6AI12 368 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 ZFAND4Q86XD8 727 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
DDX55-202ENST00000354291 FAM26EQ8N5C1 309 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 HTR3CQ8WXA8 447 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 BOCQ9BWV1 1114 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 IGSF5Q9NSI5 407 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 GULP1Q9UBP9 304 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 PCDHB11Q9Y5F2 797 aa16.23■□□□□ 0.19
DDX55-202ENST00000354291 O00370 1275 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 RAD51BO15315 384 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 NVLO15381 856 aaKnown RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 GCATO75600 419 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 FYNP06241 537 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 CHRNA3P32297 505 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 RABIFP47224 123 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 MORC3Q14149 939 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 NCAPHQ15003 741 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 PRRT3Q5FWE3 981 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 DCAF17Q5H9S7 520 aaPredicted RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 KYAT3Q6YP21 454 aaKnown RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 ERN2Q76MJ5 926 aaKnown RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 RBFAQ8N0V3 343 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 SLC35F5Q8WV83 523 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 GFM1Q96RP9 751 aaKnown RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 TCEAL2Q9H3H9 227 aaPredicted RBP16.22■□□□□ 0.19
DDX55-202ENST00000354291 KCNK4Q9NYG8 393 aa16.22■□□□□ 0.19
DDX55-202ENST00000354291 SPASTQ9UBP0 616 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms