RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 MAP4P27816 1152 aaKnown RBP18.32■□□□□ 0.52
CTSB-202ENST00000353047 LRPAP1P30533 357 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 MSLNQ13421 630 aaPredicted RBP18.32■□□□□ 0.52
CTSB-202ENST00000353047 PPP1R3AQ16821 1122 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 FAM72AQ5TYM5 149 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 GPR107Q5VW38 600 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 FAM72DQ6L9T8 149 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 ESRP1Q6NXG1 681 aaKnown RBP18.32■□□□□ 0.52
CTSB-202ENST00000353047 AAGABQ6PD74 315 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 FAM72BQ86X60 149 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.32■□□□□ 0.525e-6■■□□□ 13.3
CTSB-202ENST00000353047 STYXL1Q9Y6J8 313 aa18.32■□□□□ 0.52
CTSB-202ENST00000353047 C9IYK1 514 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 TMCC1O94876 653 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 GJA9P57773 515 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 PRKAA1Q13131 559 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CCDC153Q494R4 210 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 PRAMEF19Q5SWL8 479 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 OLFML1Q6UWY5 402 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 BLOC1S5Q8TDH9 187 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 ESAMQ96AP7 390 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CCDC68Q9H2F9 335 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 NCKIPSDQ9NZQ3 722 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 ATXN10Q9UBB4 475 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CCDC166P0CW27 439 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CNTFP26441 200 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 EPHX2P34913 555 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 PPARGP37231 505 aaPredicted RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 MAVSQ7Z434 540 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CDC26Q8NHZ8 85 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 PBXIP1Q96AQ6 731 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 GBA2Q9HCG7 927 aaPredicted RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 ARRB2P32121 409 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CEACAM7Q14002 265 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 CELF3Q5SZQ8 465 aaKnown RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 PSTKQ8IV42 348 aaKnown RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 HERC6Q8IVU3 1022 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 MAGEE2Q8TD90 523 aaPredicted RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 ACTRT2Q8TDY3 377 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
CTSB-202ENST00000353047 NIFKQ9BYG3 293 aaKnown RBP18.31■□□□□ 0.52
CTSB-202ENST00000353047 RBM22Q9NW64 420 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTSB-202ENST00000353047 HEATR9A2RTY3 570 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SCAMP3O14828 347 aaKnown RBP18.3■□□□□ 0.52
CTSB-202ENST00000353047 LGALS2P05162 132 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 CYP2C9P11712 490 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 YWHAQP27348 245 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 MYLK3Q32MK0 819 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 GPR141Q7Z602 305 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 ZFP28Q8NHY6 868 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 B3GALT6Q96L58 329 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 OR12D3Q9UGF7 316 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SFMBT1Q9UHJ3 866 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 PSMD12O00232 456 aaPredicted RBP18.3■□□□□ 0.52
CTSB-202ENST00000353047 EEF1DP29692 281 aaKnown RBP18.3■□□□□ 0.52
CTSB-202ENST00000353047 SEMA5AQ13591 1074 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SAPCD2Q86UD0 394 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 MIER2Q8N344 545 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 MAN1A2O60476 641 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SGO1Q5FBB7 561 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SPPL2CQ8IUH8 684 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 APLFQ8IW19 511 aaPredicted RBP18.3■□□□□ 0.52
CTSB-202ENST00000353047 CLEC4FQ8N1N0 589 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 PPHLN1Q8NEY8 458 aaKnown RBP18.3■□□□□ 0.52
CTSB-202ENST00000353047 BHMTQ93088 406 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 GMLQ99445 158 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SPON2Q9BUD6 331 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 ASB7Q9H672 318 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 FETUBQ9UGM5 382 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 SLC2A6Q9UGQ3 507 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 NUP205Q92621 2012 aa18.3■□□□□ 0.52
CTSB-202ENST00000353047 C1orf232A0A0U1RR37 186 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 DNERQ8NFT8 737 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 RRN3Q9NYV6 651 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 UBAP1Q9NZ09 502 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 MPP6Q9NZW5 540 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 TCRBV5S1A1TA0A578 114 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 E7ENX8 843 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 KLF11O14901 512 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 TADA2AO75478 443 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 TRMUO75648 421 aaKnown RBP18.29■□□□□ 0.52
CTSB-202ENST00000353047 ENDOD1O94919 500 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 STT3AP46977 705 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 LSM3P62310 102 aaKnown RBP18.29■□□□□ 0.52
CTSB-202ENST00000353047 CLDN10P78369 228 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 RNF111Q6ZNA4 994 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
CTSB-202ENST00000353047 ZMAT2Q96NC0 199 aaKnown RBP18.29■□□□□ 0.52
CTSB-202ENST00000353047 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 BNIP3LO60238 219 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 MYL3P08590 195 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 NCK1P16333 377 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 TPP2P29144 1249 aaPredicted RBP18.29■□□□□ 0.52
CTSB-202ENST00000353047 NR2C2P49116 596 aa18.29■□□□□ 0.52
CTSB-202ENST00000353047 TEPSINQ96N21 525 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms