RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 CCDC47Q96A33 483 aaKnown RBP16.09■□□□□ 0.17
COPE-202ENST00000349893 TBATAQ96M53 351 aa16.09■□□□□ 0.17
COPE-202ENST00000349893 CCDC114Q96M63 670 aa16.09■□□□□ 0.17
COPE-202ENST00000349893 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
COPE-202ENST00000349893 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
COPE-202ENST00000349893 ANKMY1Q9P2S6 941 aa16.09■□□□□ 0.17
COPE-202ENST00000349893 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
COPE-202ENST00000349893 USP9XQ93008 2570 aaPredicted RBP16.08■□□□□ 0.17
COPE-202ENST00000349893 SCN8AQ9UQD0 1980 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 PLD2O14939 933 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 RAD51BO15315 384 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 MT-CO1P00395 513 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 PRNPP04156 253 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC2A3P11169 496 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC5A2P31639 672 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 ACADSBP45954 432 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 RPS21P63220 83 aaKnown RBP16.08■□□□□ 0.16
COPE-202ENST00000349893 PITX1P78337 314 aaPredicted RBP16.08■□□□□ 0.16
COPE-202ENST00000349893 NFKB2Q00653 900 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 CENPCQ03188 943 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 MEA1Q16626 185 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 DEFB133Q30KQ1 61 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 FOXR1Q6PIV2 292 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 USP53Q70EK8 1073 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC35F3Q8IY50 421 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 EXTL1Q92935 676 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 RNF34Q969K3 372 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 LENG8Q96PV6 779 aaPredicted RBP16.08■□□□□ 0.16
COPE-202ENST00000349893 PSMB7Q99436 277 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 KLF6Q99612 283 aaPredicted RBP16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC4A5Q9BY07 1137 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 SLC12A6Q9UHW9 1150 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 VPS28Q9UK41 221 aa16.08■□□□□ 0.16
COPE-202ENST00000349893 MYO9AB2RTY4 2548 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 FAM237AA0A1B0GTK4 181 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 A0A1B0GVL5 298 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 CASC3O15234 703 aaKnown RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 PMM2O15305 246 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 SPINT1O43278 529 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 PCDH8O95206 1070 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 JUNDP17535 347 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 RPIAP49247 311 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 IRAK1P51617 712 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 CLCN6P51797 869 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 EIF2B5Q13144 721 aaKnown RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 MTA1Q13330 715 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 DRAP1Q14919 205 aaPredicted RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 DCAF17Q5H9S7 520 aaPredicted RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 TPRG1LQ5T0D9 272 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 TCERG1LQ5VWI1 586 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 CRTC1Q6UUV9 634 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 BTN2A2Q8WVV5 523 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 IL12RB2Q99665 862 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 CCDC3Q9BQI4 270 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 DYRK4Q9NR20 520 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 UNC79Q9P2D8 2635 aa16.07■□□□□ 0.16
COPE-202ENST00000349893 UTP20O75691 2785 aaKnown RBP16.07■□□□□ 0.16
COPE-202ENST00000349893 CLEC18AA5D8T8 446 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 LMO7DNF2Z398 122 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 MUSKO15146 869 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 AP1G1O43747 822 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 BNIP3LO60238 219 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 CLDN11O75508 207 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 GCATO75600 419 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 PAK4O96013 591 aaPredicted RBP16.06■□□□□ 0.16
COPE-202ENST00000349893 F13A1P00488 732 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 FAM87AP0C7U9 286 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 ZSCAN22P10073 491 aaPredicted RBP16.06■□□□□ 0.16
COPE-202ENST00000349893 CCR1P32246 355 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 PFN3P60673 137 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 LRMPQ12912 555 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 AUHQ13825 339 aaKnown RBP16.06■□□□□ 0.16
COPE-202ENST00000349893 SPIDRQ14159 915 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 CLEC18BQ6UXF7 455 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 C14orf80Q86SX3 495 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 TMEM110Q86TL2 294 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 CLEC18CQ8NCF0 446 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 CHST14Q8NCH0 376 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 LMX1AQ8TE12 382 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 ASB12Q8WXK4 309 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 GLMNQ92990 594 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 PPP1R16AQ96I34 528 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 RPRD1AQ96P16 312 aaPredicted RBP16.06■□□□□ 0.16
COPE-202ENST00000349893 ARHGAP9Q9BRR9 750 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 C1QTNF2Q9BXJ5 285 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 ST7Q9NRC1 585 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 SPASTQ9UBP0 616 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 FADS3Q9Y5Q0 445 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 NBPF19A0A087WUL8 3843 aa16.06■□□□□ 0.16
COPE-202ENST00000349893 SPTAN1Q13813 2472 aaKnown RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 TMX2-CTNND1H3BSU7 103 aa16.05■□□□□ 0.16
COPE-202ENST00000349893 K7ELQ4 463 aaPredicted RBP16.05■□□□□ 0.16
COPE-202ENST00000349893 K7ERQ8 282 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms