RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 SELENOMQ8WWX9 145 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 ANAPC2Q9UJX6 822 aa23.4■■□□□ 1.34
NPAS3-201ENST00000346562 PDE9AO76083 593 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 INO80DQ53TQ3 878 aaPredicted RBP23.39■■□□□ 1.34
NPAS3-201ENST00000346562 LPCAT2Q7L5N7 544 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 DET1Q7L5Y6 550 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 FIBCD1Q8N539 461 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 OR6Y1Q8NGX8 325 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 CD248Q9HCU0 757 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 PCDHA11Q9Y5I1 949 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 ASTN2O75129 1339 aaPredicted RBP23.39■■□□□ 1.34
NPAS3-201ENST00000346562 TAL1P17542 331 aaPredicted RBP23.39■■□□□ 1.34
NPAS3-201ENST00000346562 HTR1BP28222 390 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 DGUOKQ16854 277 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 ARMC3Q5W041 872 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 MARK2Q7KZI7 788 aaKnown RBP23.39■■□□□ 1.34
NPAS3-201ENST00000346562 RIOX2Q8IUF8 465 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 ENKURQ8TC29 256 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 ASB8Q9H765 288 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 ZNHIT2Q9UHR6 403 aa23.39■■□□□ 1.34
NPAS3-201ENST00000346562 FAM46CQ5VWP2 391 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 RAP1GAP2Q684P5 730 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 MZT2AQ6P582 158 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 PACS1Q6VY07 963 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 STK32CQ86UX6 486 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 MRPS23Q9Y3D9 190 aaKnown RBP23.39■■□□□ 1.33
NPAS3-201ENST00000346562 FCHO1O14526 889 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 OR10H2O60403 315 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 PRMT3O60678 531 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 TBL1XO60907 577 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 ME2P23368 584 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 RPL14P50914 215 aaKnown RBP23.39■■□□□ 1.33
NPAS3-201ENST00000346562 PFKPQ01813 784 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 NDUFAF6Q330K2 333 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 EFCAB3Q8N7B9 438 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 ZNF671Q8TAW3 534 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 CORO1BQ9BR76 489 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 MYLK2Q9H1R3 596 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 PORCNQ9H237 461 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 KLQ9UEF7 1012 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 OR12D3Q9UGF7 316 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 FAM50BQ9Y247 325 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 PNMA8CA0A1B0GUJ8 204 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 OPLAHO14841 1288 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 KLHL18O94889 574 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 CSH1P0DML2 217 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 CSH2P0DML3 217 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 WARSP23381 471 aaKnown RBP23.39■■□□□ 1.33
NPAS3-201ENST00000346562 HJURPQ8NCD3 748 aaPredicted RBP23.39■■□□□ 1.33
NPAS3-201ENST00000346562 GPN3Q9UHW5 284 aaPredicted RBP23.39■■□□□ 1.33
NPAS3-201ENST00000346562 ANGPT4Q9Y264 503 aa23.39■■□□□ 1.33
NPAS3-201ENST00000346562 CHADO15335 359 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 GCATO75600 419 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 CD86P42081 329 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 RPL21P46778 160 aaKnown RBP23.38■■□□□ 1.33
NPAS3-201ENST00000346562 C21orf59P57076 290 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 KIFC1Q9BW19 673 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 SH3BGRLO75368 114 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 TRAF3Q13114 568 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ADHFE1Q8IWW8 467 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ZNF624Q9P2J8 865 aaPredicted RBP23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ATP9AO75110 1047 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 NPR3P17342 541 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 CDC42P60953 191 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 LRRC74BQ6ZQY2 392 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ZNF276Q8N554 614 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 AASDHPPTQ9NRN7 309 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ADH1AP07327 375 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 SERPINA13PQ6UXR4 307 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ZDHHC13Q8IUH4 622 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 ZYG11BQ9C0D3 744 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 SEMA4AQ9H3S1 761 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 RHBDL2Q9NX52 303 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 TNFSF13BQ9Y275 285 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 OR10H1Q9Y4A9 318 aa23.38■■□□□ 1.33
NPAS3-201ENST00000346562 SMIM10L2AP0DMW4 78 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SMIM10L2BP0DMW5 78 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 RBL1P28749 1068 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 MAPKAPK2P49137 400 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 COL26A1Q96A83 441 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 CYP3A4P08684 503 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 POLD2P49005 469 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 EIF3MQ7L2H7 374 aaKnown RBP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 HEATR4Q86WZ0 1026 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 TBCDQ9BTW9 1192 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SLC9A8Q9Y2E8 581 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SLC25A12O75746 678 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 KDELR1P24390 212 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 TTPAP49638 278 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 CNTN2Q02246 1040 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 ZCCHC9Q8N567 271 aaKnown RBP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 TINF2Q9BSI4 451 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 CXorf56Q9H5V9 222 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 TPP1O14773 563 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 UBOX5O94941 541 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 USP41Q3LFD5 358 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 SNX32Q86XE0 403 aa23.37■■□□□ 1.33
NPAS3-201ENST00000346562 ZFRQ96KR1 1074 aaKnown RBP23.37■■□□□ 1.33
NPAS3-201ENST00000346562 MIR1-1HGQ9H1L0 117 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms