RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 E7ENX8 843 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 TXNL4AP83876 142 aaKnown RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 NSUN2Q08J23 767 aaKnown RBP eCLIP18.06■□□□□ 0.48
VHL-202ENST00000345392 MPP3Q13368 585 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 VGLL4Q14135 290 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 GRM3Q14832 879 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 CCNYL1Q8N7R7 359 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 SNX31Q8N9S9 440 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 APBA2Q99767 749 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 C11orf84Q9BUA3 381 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 SPATC1LQ9H0A9 340 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 NOL11Q9H8H0 719 aaKnown RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 CHRAC1Q9NRG0 131 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 ZNF711Q9Y462 761 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 A0A087WZ62 844 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 C9IYK1 514 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 H3BNH8 94 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 TRIM38O00635 465 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 TADA2AO75478 443 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 VTNP04004 478 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 CKMT2P17540 419 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 EPHX2P34913 555 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PTPN9P43378 593 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 ALDH3B2P48448 385 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PRAMEP78395 509 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PRKAA1Q13131 559 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 CARM1Q86X55 608 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.06■□□□□ 0.48
VHL-202ENST00000345392 PPP1R13LQ8WUF5 828 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 KCTD4Q8WVF5 259 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 CENPIQ92674 756 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 MAML3Q96JK9 1138 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 OMDQ99983 421 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 FDXACB1Q9BRP7 624 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 DPEP3Q9H4B8 488 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 TMEM165Q9HC07 324 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 KLHL8Q9P2G9 620 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 KIAA1257Q9ULG3 409 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 RUVBL2Q9Y230 463 aaKnown RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 MYRFQ9Y2G1 1151 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PPEF2O14830 753 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 EDNRBP24530 442 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 RPS12P25398 132 aaKnown RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 ADORA2BP29275 332 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PSME3P61289 254 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PITX1P78337 314 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 C16orf72Q14CZ0 275 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 GLRA4Q5JXX5 417 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 ZYG11AQ6WRX3 759 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 KCNMB4Q86W47 210 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 SPNS2Q8IVW8 549 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 RMND5BQ96G75 393 aaPredicted RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 DCUN1D5Q9BTE7 237 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 PDZD7Q9H5P4 517 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 EBF1Q9UH73 591 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 CNOT11Q9UKZ1 510 aaKnown RBP18.06■□□□□ 0.48
VHL-202ENST00000345392 PCDHGA7Q9Y5G6 932 aa18.06■□□□□ 0.48
VHL-202ENST00000345392 H2AFYO75367 372 aaKnown RBP18.05■□□□□ 0.48
VHL-202ENST00000345392 CLCN2P51788 898 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 RBP5P82980 135 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 PDAP1Q13442 181 aaKnown RBP18.05■□□□□ 0.48
VHL-202ENST00000345392 TRIM25Q14258 630 aaKnown RBP18.05■□□□□ 0.48
VHL-202ENST00000345392 ZNF460Q14592 562 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 TMEM135Q86UB9 458 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 HERC6Q8IVU3 1022 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 CPNE9Q8IYJ1 553 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 SLCO4A1Q96BD0 722 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 ASB9Q96DX5 294 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 BFARQ9NZS9 450 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 TLK1Q9UKI8 766 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 TMX2-CTNND1H3BSU7 103 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 PDGFRBP09619 1106 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 FAM219BQ5XKK7 198 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 FAM110BQ8TC76 370 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 LPGAT1Q92604 370 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 PPWD1Q96BP3 646 aaKnown RBP18.05■□□□□ 0.48
VHL-202ENST00000345392 FAM167AQ96KS9 214 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 OSBPL11Q9BXB4 747 aa18.05■□□□□ 0.48
VHL-202ENST00000345392 BOLA2-SMG1P6H3BVE0 249 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 SUPT3HO75486 399 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 TFPTP0C1Z6 253 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 PLOD1Q02809 727 aaPredicted RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 DGKDQ16760 1214 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 ANKDD1AQ495B1 522 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 LAYNQ6UX15 382 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 CLVS1Q8IUQ0 354 aaPredicted RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 FSTL5Q8N475 847 aaPredicted RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 CNTD1Q8N815 330 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 SGF29Q96ES7 293 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 RANBP9Q96S59 729 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 UBP1Q9NZI7 540 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 ZNF638Q14966 1978 aaKnown RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 MAGEA10P43363 369 aaPredicted RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 GLUD2P49448 558 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 RFTN1Q14699 578 aaPredicted RBP18.04■□□□□ 0.48
VHL-202ENST00000345392 BBS5Q8N3I7 341 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 OR6B3Q8NGW1 331 aa18.04■□□□□ 0.48
VHL-202ENST00000345392 SLC7A14Q8TBB6 771 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms