RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 C14orf166Q9Y224 244 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PCDH11YQ9BZA8 1340 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 A0A0A6YYJ9 748 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CCNT2O60583 730 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GCATO75600 419 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ANXA5P08758 320 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ARP10275 920 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C6orf183Q5T699 404 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CDKAL1Q5VV42 579 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 EGFLAMQ63HQ2 1017 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GALNT18Q6P9A2 607 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C16orf86Q6ZW13 317 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ZSWIM3Q96MP5 696 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CIB1Q99828 191 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC26A6Q9BXS9 759 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CALN1Q9BXU9 219 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CABP2Q9NPB3 220 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HPS4Q9NQG7 708 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NANSQ9NR45 359 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 LGALS16A8MUM7 142 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PHF20L1A8MW92 1017 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 BRAFP15056 766 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RPLP0P6Q8NHW5 317 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TTYH1Q9H313 450 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MED9Q9NWA0 146 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NMRK1Q9NWW6 199 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PON1P27169 355 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TMPOP42166 694 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HSD17B4P51659 736 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MYLK3Q32MK0 819 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 BRDTQ58F21 947 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC35F1Q5T1Q4 408 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PHACTR4Q8IZ21 702 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLITRK2Q9H156 845 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TRAF6Q9Y4K3 522 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FAM149AA5PLN7 773 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 BHLHE40O14503 412 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ZW10O43264 779 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MPZL2O60487 215 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HMOX1P09601 288 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SLC16A2P36021 539 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 KRT33BQ14525 404 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 XKR3Q5GH77 459 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ANKMY2Q8IV38 441 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SCUBE3Q8IX30 993 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CYP4Z2PQ8N1L4 340 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RNF34Q969K3 372 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RNPEPQ9H4A4 650 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ATP13A2Q9NQ11 1180 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 PCDH11XQ9BZA7 1347 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 STAU1O95793 577 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GRIA1P42261 906 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 LIG4P49917 911 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 EVA1CP58658 441 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SEMA3BQ13214 749 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SAPCD1Q5SSQ6 148 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 USPL1Q5W0Q7 1092 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GTF2IRD2BQ6EKJ0 949 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GRHL2Q6ISB3 625 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GTF2IRD2Q86UP8 949 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MB21D1Q8N884 522 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TBC1D10AQ9BXI6 508 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CAPN10Q9HC96 672 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HPSEQ9Y251 543 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 MAB21L2Q9Y586 359 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 DOPEY2Q9Y3R5 2298 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CNOT4O95628 575 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CTSHP09668 335 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 INHBCP55103 352 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TRIM72Q6ZMU5 477 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 AHCYL2Q96HN2 611 aaKnown RBP3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TRIM62Q9BVG3 475 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GSDMCQ9BYG8 508 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ACTR6Q9GZN1 396 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SIK3Q9Y2K2 1263 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 SYNJ2O15056 1496 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NPIPA7E9PJI5 369 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 H0YIV9 168 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CHST10O43529 356 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CLPXO76031 633 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 GDF11O95390 407 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ASNSP08243 561 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 RBP1P09455 135 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NPIPA8P0DM63 369 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 DNAJB1P25685 340 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 KRT31Q15323 416 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 ARHGAP36Q6ZRI8 547 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 HDDC3Q8N4P3 179 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 C1orf54Q8WWF1 131 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 TMEM143Q96AN5 459 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 NFAT5O94916 1531 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 A0A1B0GVC2 190 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FANCGO15287 622 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 KCNA5P22460 613 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 Q6ZUG5 572 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 FRMD7Q6ZUT3 714 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 IFNEQ86WN2 208 aa3.81□□□□□ -1.8
SYNE2-202ENST00000344113 CMTR2Q8IYT2 770 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms