RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 MPP6Q9NZW5 540 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 RGS20O76081 388 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 FKBP9O95302 570 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 MYL4P12829 197 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 NR4A1P22736 598 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 OR1G1P47890 313 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 TRAF2Q12933 501 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 PLCL1Q15111 1095 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 MGAT5BQ3V5L5 792 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 ZFP1Q6P2D0 407 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 FKBP9P1Q75LS8 142 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 TTC30AQ86WT1 665 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 NAT14Q8WUY8 206 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 DGCR6LQ9BY27 220 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 NDUFAF1Q9Y375 327 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 CACNA1SQ13698 1873 aa12.6□□□□□ -0.39
SNRNP48-201ENST00000342415 KLRG2A4D1S0 409 aaPredicted RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 M0R3G1 203 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 AP3B1O00203 1094 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 CKMT2P17540 419 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ARHGDIAP52565 204 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 THOP1P52888 689 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SEMA5AQ13591 1074 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 MAPK11Q15759 364 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 CAND1Q86VP6 1230 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TRPC4APQ8TEL6 797 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SENP8Q96LD8 212 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 EIF2AQ9BY44 585 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 IL22Q9GZX6 179 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LIN28AQ9H9Z2 209 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 FBXO5Q9UKT4 447 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 DOLKQ9UPQ8 538 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 FARP1Q9Y4F1 1045 aaPredicted RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 CNTRLQ7Z7A1 2325 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 HACD1B0YJ81 288 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 PSMD3O43242 534 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 RFPL1O75677 317 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ARIH2O95376 493 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 F9P00740 461 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 NPR3P17342 541 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 NMBRP28336 390 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 BEX3Q00994 111 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 KCNJ11Q14654 390 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SDHAF4Q5VUM1 108 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LIPMQ5VYY2 423 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SAPCD2Q86UD0 394 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LPPQ93052 612 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SLC39A3Q9BRY0 314 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TBCDQ9BTW9 1192 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 RRN3Q9NYV6 651 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 KIF17Q9P2E2 1029 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TIAM2Q8IVF5 1701 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 IRS2Q9Y4H2 1338 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 GUCA1CO95843 209 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 THP07101 528 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 IRF1P10914 325 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 NPY2RP49146 381 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SCNN1BP51168 640 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 BFSP2Q13515 415 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ACBD5Q5T8D3 534 aaPredicted RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 GPR107Q5VW38 600 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ERO1BQ86YB8 467 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ZDHHC17Q8IUH5 632 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 RP9Q8TA86 221 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 FAM162AQ96A26 154 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 MCRS1Q96EZ8 462 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 KLHL5Q96PQ7 755 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 HBEGFQ99075 208 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SPATA16Q9BXB7 569 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 OXCT2Q9BYC2 517 aaPredicted RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 CASS4Q9NQ75 786 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 OLA1Q9NTK5 396 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 ZNF180Q9UJW8 692 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 KIF13AQ9H1H9 1805 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TJP1Q07157 1748 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LINC00854A0A1B0GVQ3 168 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 MAGEB16A2A368 324 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 DNAJA2O60884 412 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TADA2AO75478 443 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 RBP1P09455 135 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 GCAP28676 217 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LSM3P62310 102 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SNAPC2Q13487 334 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TRIM16LQ309B1 348 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 MARC1Q5VT66 337 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 FAM81AQ8TBF8 368 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LPGAT1Q92604 370 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 TBL1YQ9BQ87 522 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 SIX4Q9UIU6 781 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 PKP3Q9Y446 797 aa12.59□□□□□ -0.39
SNRNP48-201ENST00000342415 LAMB4A4D0S4 1761 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms