RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 RHPN2Q8IUC4 686 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 TFB1MQ8WVM0 346 aaKnown RBP12.05□□□□□ -0.48
RTN3-203ENST00000341307 SHC3Q92529 594 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 PSKH2Q96QS6 385 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 CDK5RAP1Q96SZ6 601 aaKnown RBP12.05□□□□□ -0.48
RTN3-203ENST00000341307 PAFAH2Q99487 392 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 TMEM79Q9BSE2 394 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 HMGXB4Q9UGU5 601 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 A0A087WXM4 84 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GOLGA8QA0A0J9YX86 632 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 PRSS51A0A1B0GVH4 220 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GOLGA8OA6NCC3 632 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GOLGA8NF8WBI6 632 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 H0YCG3 227 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 PMM2O15305 246 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GCATO75600 419 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 ATP5BP06576 529 aaKnown RBP12.05□□□□□ -0.48
RTN3-203ENST00000341307 CYP11B1P15538 503 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 M6PRP20645 277 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 ADORA2AP29274 412 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 OPRL1P41146 370 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 NIPAL4Q0D2K0 466 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 LAMTOR4Q0VGL1 99 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 TEX44Q53QW1 395 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 FAM47CQ5HY64 1035 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 KRT80Q6KB66 452 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GPRC5AQ8NFJ5 357 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 OR5B17Q8NGF7 314 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.05□□□□□ -0.48
RTN3-203ENST00000341307 DCAKDQ8WVC6 231 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 SERAC1Q96JX3 654 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 BEGAINQ9BUH8 593 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 RUBCNLQ9H714 662 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 RMND5AQ9H871 391 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 NEK6Q9HC98 313 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 TXNDC16Q9P2K2 825 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 STYXL1Q9Y6J8 313 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 CLUHO75153 1309 aa12.05□□□□□ -0.48
RTN3-203ENST00000341307 FAM172BPA6NC97 362 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 TAF4O00268 1085 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 TSPAN9O75954 239 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 CLPXO76031 633 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 MTA2O94776 668 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 CTGFP29279 349 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 SSTR3P32745 418 aaPredicted RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 CLCN3P51790 818 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 GPC5P78333 572 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 FMO1Q01740 532 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 PPP2R5DQ14738 602 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 C15orf39Q6ZRI6 1047 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 FRMD7Q6ZUT3 714 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 SH2D5Q6ZV89 423 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 BEND7Q8N7W2 519 aaPredicted RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 PGBD4Q96DM1 585 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 APOPT1Q96IL0 206 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 ZNF347Q96SE7 839 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 C1orf50Q9BV19 199 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 SEPT3Q9UH03 358 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 I3L4J1 428 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 MSCO60682 206 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 VNN1O95497 513 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 C4BPAP04003 597 aaKnown RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 KRT10P13645 584 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 POLR2CP19387 275 aaPredicted RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 ACAT1P24752 427 aaKnown RBP12.04□□□□□ -0.48
RTN3-203ENST00000341307 C19orf57Q0VDD7 668 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 CARTPTQ16568 116 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 SLX4IPQ5VYV7 408 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 AKAP14Q86UN6 197 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 GLIS1Q8NBF1 620 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 OSBPL11Q9BXB4 747 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 SEZ6LQ9BYH1 1024 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 DSEQ9UL01 958 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 ADGRA2Q96PE1 1338 aa12.04□□□□□ -0.48
RTN3-203ENST00000341307 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.03□□□□□ -0.48
RTN3-203ENST00000341307 B4GALT5O43286 388 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 KCNJ13O60928 360 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZMPSTE24O75844 475 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 HLA-DRAP01903 254 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 KRT6AP02538 564 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 KRT6BP04259 564 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 L1CAMP32004 1257 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 SLC26A2P50443 739 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZNF132P52740 706 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 OSTNP61366 133 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZACNQ401N2 412 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 C2CD6Q53TS8 623 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 ZFP1Q6P2D0 407 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 CDHR3Q6ZTQ4 885 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 USP37Q86T82 979 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 TMEM130Q8N3G9 435 aa12.03□□□□□ -0.48
RTN3-203ENST00000341307 PPP1R13LQ8WUF5 828 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms