RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 SEPT3Q9UH03 358 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 PLA2G4CQ9UP65 541 aa18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 MUC22E2RYF6 1773 aaPredicted RBP18.21■□□□□ 0.51
SDCBP2-201ENST00000339987 KRBA1A5PL33 1030 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 C5orf60A6NFR6 353 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 SGK1O00141 431 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 ATP9BO43861 1147 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 TMCC1O94876 653 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 EGFP01133 1207 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 JCHAINP01591 159 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 CHRM1P11229 460 aaPredicted RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 SRCP12931 536 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 HNRNPLP14866 589 aaKnown RBP eCLIP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 MMP13P45452 471 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 STK19P49842 368 aaPredicted RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 SLC10A7Q0GE19 358 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 ZBTB17Q13105 803 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 CYTH1Q15438 398 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 FBXO43Q4G163 708 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 TEX44Q53QW1 395 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 ATP11CQ8NB49 1132 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 CCDC26Q8TAB7 109 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 ISG20Q96AZ6 181 aaKnown RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 MYO19Q96H55 970 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 RPL10LQ96L21 214 aaKnown RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 PSKH2Q96QS6 385 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 CEP44Q9C0F1 390 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 HAUS2Q9NVX0 235 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 SEPT10Q9P0V9 454 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 THAP10Q9P2Z0 257 aaPredicted RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 TRHDEQ9UKU6 1024 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 HCN2Q9UL51 889 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 MRPS17Q9Y2R5 130 aaKnown RBP18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 ACTL7AQ9Y615 435 aa18.2■□□□□ 0.5
SDCBP2-201ENST00000339987 GCATO75600 419 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 HSPA9P38646 679 aaKnown RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 NNMTP40261 264 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 PTGIRP43119 386 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 KIR2DL1P43626 348 aaPredicted RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 GDF10P55107 478 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ST8SIA6P61647 398 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ZXDAP98168 799 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 DHX34Q14147 1143 aaKnown RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF235Q14590 738 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 P3H1Q32P28 736 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF687Q8N1G0 1237 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 MMGT1Q8N4V1 131 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF419Q96HQ0 510 aaPredicted RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 TEKT5Q96M29 485 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 SPATA13Q96N96 652 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 UHRF1Q96T88 793 aaPredicted RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 KRT12Q99456 494 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 CINPQ9BW66 212 aaPredicted RBP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 RBM22Q9NW64 420 aaKnown RBP eCLIP18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 SLCO3A1Q9UIG8 710 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 ATP8A1Q9Y2Q0 1164 aa18.19■□□□□ 0.5
SDCBP2-201ENST00000339987 K7ERQ8 282 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 SMAD6O43541 496 aaKnown RBP18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 OPHN1O60890 802 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 ECEL1O95672 775 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 GAS8O95995 478 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 ENPP2Q13822 863 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 CCINQ13939 588 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF234Q14588 700 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 DGKKQ5KSL6 1271 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 EGFLAMQ63HQ2 1017 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 SYDE1Q6ZW31 735 aaPredicted RBP18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 GSTA5Q7RTV2 222 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF567Q8N184 647 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 SIX5Q8N196 739 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 PCDH20Q8N6Y1 951 aaKnown RBP18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 CNTD1Q8N815 330 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 CCDC89Q8N998 374 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 USP33Q8TEY7 942 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 NELL2Q99435 816 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 PCDH9Q9HC56 1237 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 KLHL8Q9P2G9 620 aaPredicted RBP18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 LHX3Q9UBR4 397 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 SLC8A2Q9UPR5 921 aa18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 FCF1Q9Y324 198 aaKnown RBP18.18■□□□□ 0.5
SDCBP2-201ENST00000339987 KANSL1LA0AUZ9 987 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 NEBLO76041 1014 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 IFNB1P01574 187 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 HLA-DQB2P05538 268 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 CD72P21854 359 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 NRLP54845 237 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 MRPS21P82921 87 aaKnown RBP18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 DR1Q01658 176 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 DLG2Q15700 870 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 FNDC3BQ53EP0 1204 aaKnown RBP18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 ANKRD20A2Q5SQ80 823 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 ANKRD20A1Q5TYW2 823 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 ANKRD20A3Q5VUR7 823 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 ALG1LQ6GMV1 187 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 C4orf22Q6V702 233 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 PLPP6Q8IY26 295 aa18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 ZNF513Q8N8E2 541 aaPredicted RBP18.17■□□□□ 0.5
SDCBP2-201ENST00000339987 FRS2Q8WU20 508 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms