RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 C4orf22Q6V702 233 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 FRA10AC1Q70Z53 315 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ERMP1Q7Z2K6 904 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 CLEC14AQ86T13 490 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 LDHDQ86WU2 507 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 CAMK1DQ8IU85 385 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 EPHX4Q8IUS5 362 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 DCLK2Q8N568 766 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 PCDH19Q8TAB3 1148 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF347Q96SE7 839 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 CSF3RQ99062 836 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 EFHD1Q9BUP0 239 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 HERC2P3Q9BVR0 1158 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 ADAMTS10Q9H324 1103 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 MRPL40Q9NQ50 206 aaKnown RBP9.55□□□□□ -0.88
NECAP1-201ENST00000339754 KLHL3Q9UH77 587 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SARDHQ9UL12 918 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 TRAF6Q9Y4K3 522 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 HES2Q9Y543 173 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 SNX9Q9Y5X1 595 aa9.55□□□□□ -0.88
NECAP1-201ENST00000339754 KPNA7A9QM74 516 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 APOL1O14791 398 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 PIGNO95427 931 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CRKP46108 304 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 HK2P52789 917 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 MYL6P60660 151 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 IRF9Q00978 393 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SELENBP1Q13228 472 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SEMA5AQ13591 1074 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 MTMR1Q13613 665 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 NEDD8Q15843 81 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SMUG1Q53HV7 270 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 AGAP7PQ5VUJ5 663 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 NXNQ6DKJ4 435 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 TRNP1Q6NT89 227 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CASC4Q6P4E1 433 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 GK5Q6ZS86 529 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CHST15Q7LFX5 561 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-201ENST00000339754 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 PDPRQ8NCN5 879 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CANT1Q8WVQ1 401 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SH3YL1Q96HL8 342 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 VPS33BQ9H267 617 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 ASNSD1Q9NWL6 643 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CDYLQ9Y232 598 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 ST14Q9Y5Y6 855 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 HEATR9A2RTY3 570 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF839A8K0R7 811 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 H2AFYO75367 372 aaKnown RBP9.54□□□□□ -0.88
NECAP1-201ENST00000339754 KCNH1O95259 989 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 CPNE6O95741 557 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 ERVK-10P10266 1014 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 OPRL1P41146 370 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 ZNF143P52747 638 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-201ENST00000339754 FSTL1Q12841 308 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SEZ6Q53EL9 994 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 GADL1Q6ZQY3 521 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 LSMEM2Q8N112 164 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 TMEM151AQ8N4L1 468 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 HMGCLL1Q8TB92 370 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 PBXIP1Q96AQ6 731 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 MCRS1Q96EZ8 462 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 FBXL20Q96IG2 436 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 GPN2Q9H9Y4 310 aaPredicted RBP9.54□□□□□ -0.88
NECAP1-201ENST00000339754 PSME2Q9UL46 239 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
NECAP1-201ENST00000339754 SEC14L2O76054 403 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 JUNBP17275 347 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-201ENST00000339754 TCEA1P23193 301 aaKnown RBP9.53□□□□□ -0.88
NECAP1-201ENST00000339754 MGAT1P26572 445 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 HPCAL1P37235 193 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 GP5P40197 560 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 IFITM3Q01628 133 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 DLG2Q15700 870 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 NDUFA5Q16718 116 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 KIZQ2M2Z5 673 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 GLRA4Q5JXX5 417 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 GRTP1Q5TC63 336 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 ABRAXAS1Q6UWZ7 409 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 ABHD11Q8NFV4 315 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 ACER1Q8TDN7 264 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 SNX19Q92543 992 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 MTG1Q9BT17 334 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-201ENST00000339754 NDEL1Q9GZM8 345 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 KLHL25Q9H0H3 589 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 NMRAL1Q9HBL8 299 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 GPATCH2LQ9NWQ4 482 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 PIH1D1Q9NWS0 290 aaKnown RBP9.53□□□□□ -0.88
NECAP1-201ENST00000339754 ANKMY1Q9P2S6 941 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 VTI1BQ9UEU0 232 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 CLOCKO15516 846 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 MYO1DO94832 1006 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 SBK3P0C264 359 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 MLNP12872 115 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 TFE3P19532 575 aaPredicted RBP9.53□□□□□ -0.88
NECAP1-201ENST00000339754 TGM1P22735 817 aa9.53□□□□□ -0.88
NECAP1-201ENST00000339754 YAP1P46937 504 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms