RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ICMTO60725 284 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ALDH1A2O94788 518 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 BPGMP07738 259 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 IQCF3P0C7M6 154 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TCF4P15884 667 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 NR4A2P43354 598 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ARSEP51690 589 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 GDF10P55107 478 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FCGRTP55899 365 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 P2RX3P56373 397 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 EIF3EP60228 445 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ACAP2Q15057 778 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TAF1CQ15572 869 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CHI3L2Q15782 390 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 NRF1Q16656 503 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SCARA3Q6AZY7 606 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ZFP1Q6P2D0 407 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 MFSD4AQ8N468 514 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FBXO36Q8NEA4 188 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 CMASQ8NFW8 434 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 RMND5BQ96G75 393 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TXNDC15Q96J42 360 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TAAR1Q96RJ0 339 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 ZNF347Q96SE7 839 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 RTKNQ9BST9 563 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 FRMD8Q9BZ67 464 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 SMYD2Q9NRG4 433 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 BCAP29Q9UHQ4 241 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 DRG1Q9Y295 367 aaKnown RBP5.69□□□□□ -1.5
CSDE1-202ENST00000339438 TICRRQ7Z2Z1 1910 aa5.69□□□□□ -1.5
CSDE1-202ENST00000339438 KLHL41O60662 606 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 LYPLA1O75608 230 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 STAM2O75886 525 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ALX3O95076 343 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 COX4I1P13073 169 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GLULP15104 373 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 MSX2P35548 267 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PSMC2P35998 433 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TUFMP49411 452 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 C19orf57Q0VDD7 668 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CELF3Q5SZQ8 465 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 XAF1Q6GPH4 301 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 C16orf46Q6P387 395 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GALNT18Q6P9A2 607 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC81Q6ZN84 652 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 MYO1HQ8N1T3 1032 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CLIP4Q8N3C7 705 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NATD1Q8N6N6 113 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 UBR7Q8N806 425 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ANGPTL6Q8NI99 470 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 FAM110BQ8TC76 370 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CHURC1Q8WUH1 139 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 THAP11Q96EK4 314 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CCDC138Q96M89 665 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GUCD1Q96NT3 240 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TCF12Q99081 682 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 HSD17B14Q9BPX1 270 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NIFKQ9BYG3 293 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TTYH1Q9H313 450 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CAAP1Q9H8G2 361 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 AGO4Q9HCK5 861 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PNPLA8Q9NP80 782 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 DNAJC28Q9NX36 388 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TEX264Q9Y6I9 313 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CXorf49A8MYA2 514 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TRIM77I1YAP6 450 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SLC26A4O43511 780 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CLPXO76031 633 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 KLHL2O95198 593 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GLDCP23378 1020 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 MYF6P23409 242 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 QARSP47897 775 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PSMD8P48556 350 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GPS1Q13098 491 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 AQP6Q13520 282 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 DPYSQ14117 519 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ARHGEF6Q15052 776 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 FXNQ16595 210 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 FAM47CQ5HY64 1035 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ATAD3BQ5T9A4 648 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GPR107Q5VW38 600 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 XRRA1Q6P2D8 792 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 C4orf22Q6V702 233 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ZCCHC23Q6ZST2 131 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ANKRD13BQ86YJ7 626 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 TMCO5AQ8N6Q1 288 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 PIWIL2Q8TC59 973 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SHC3Q92529 594 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CLPBQ9H078 707 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 GPN2Q9H9Y4 310 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 C3orf70A6NLC5 250 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-202ENST00000339438 NUAK1O60285 661 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 SEC14L2O76054 403 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 CRYZL1O95825 349 aa5.68□□□□□ -1.5
CSDE1-202ENST00000339438 ITGAVP06756 1048 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms