RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 K7ERQ8 282 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 CNTN5O94779 1100 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 MT-CO3P00414 261 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 PRNPP04156 253 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 ALPPL2P10696 532 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 CKMT1AP12532 417 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 KRT9P35527 623 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 UBE2HP62256 183 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 SLC6A3Q01959 620 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 APBA1Q02410 837 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 PTK2Q05397 1052 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 CCDC173Q0VFZ6 552 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 EXOC3L4Q17RC7 722 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 PTPN20Q4JDL3 420 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 ALFQ53S48 1182 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 OTUD1Q5VV17 481 aaPredicted RBP15.99■□□□□ 0.15
LINC01116-202ENST00000339037 SETD3Q86TU7 594 aaPredicted RBP15.99■□□□□ 0.15
LINC01116-202ENST00000339037 ERICH1Q86X53 443 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 CREBRFQ8IUR6 639 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 DCAF4L2Q8NA75 395 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 OR13H1Q8NG92 308 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 GRIN3AQ8TCU5 1115 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 PSMB7Q99436 277 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 TKTL2Q9H0I9 626 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 WDCPQ9H6R7 721 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 RRN3Q9NYV6 651 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 PAXBP1Q9Y5B6 917 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 DOCK9Q9BZ29 2069 aa15.99■□□□□ 0.15
LINC01116-202ENST00000339037 TEX51A0A1B0GUA7 166 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 SMAD6O43541 496 aaKnown RBP15.98■□□□□ 0.15
LINC01116-202ENST00000339037 PIAS2O75928 621 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 C1QL1O75973 258 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 PCDH8O95206 1070 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ADCY5O95622 1261 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 RECQLP46063 649 aaPredicted RBP15.98■□□□□ 0.15
LINC01116-202ENST00000339037 CLDN2P57739 230 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 BRMS1LQ5PSV4 323 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 LRRC31Q6UY01 552 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 LINGO4Q6UY18 593 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 GCNT7Q6ZNI0 430 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ERN2Q76MJ5 926 aaKnown RBP15.98■□□□□ 0.15
LINC01116-202ENST00000339037 GPR155Q7Z3F1 870 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 TFAP2DQ7Z6R9 452 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ZDHHC17Q8IUH5 632 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 SPACA3Q8IXA5 215 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 SLC22A18ASQ8N1D0 253 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 CHST14Q8NCH0 376 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 LSM14AQ8ND56 463 aaKnown RBP15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ZNF397Q8NF99 534 aaPredicted RBP15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ARRDC3Q96B67 414 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 PPP1R16AQ96I34 528 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 LGMNQ99538 433 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 HDAC8Q9BY41 377 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 ARHGEF38Q9NXL2 777 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 RWDD2AQ9UIY3 292 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 STAP1Q9ULZ2 295 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 PCDHB1Q9Y5F3 818 aa15.98■□□□□ 0.15
LINC01116-202ENST00000339037 SHROOM3Q8TF72 1996 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 A0A0D9SEW6 157 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 OPA1O60313 960 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 CXCR3P49682 368 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 TMEM259Q4ZIN3 620 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 SEL1L3Q68CR1 1132 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 C22orf39Q6P5X5 142 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 PTAR1Q7Z6K3 402 aaPredicted RBP15.97■□□□□ 0.15
LINC01116-202ENST00000339037 ABI3BPQ7Z7G0 1075 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 ZNF683Q8IZ20 524 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 ZDHHC16Q969W1 377 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 IFT43Q96FT9 208 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 DEPDC7Q96QD5 511 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 NPY6RQ99463 290 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 TNKS2Q9H2K2 1166 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 ANLNQ9NQW6 1124 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 DNAJC28Q9NX36 388 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.97■□□□□ 0.15
LINC01116-202ENST00000339037 NLGN3Q9NZ94 848 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 IL36AQ9UHA7 158 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 ZFR2Q9UPR6 939 aaKnown RBP15.97■□□□□ 0.15
LINC01116-202ENST00000339037 PIEZO2Q9H5I5 2752 aa15.97■□□□□ 0.15
LINC01116-202ENST00000339037 BOD1L1Q8NFC6 3051 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 GTPBP10A4D1E9 387 aaKnown RBP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 NEMP2A6NFY4 417 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 A6NNZ2 444 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 I6L893 689 aaPredicted RBP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 RNF103O00237 685 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 LEFTY1O75610 366 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 ENDOD1O94919 500 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 MPOP05164 745 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 GP1BAP07359 652 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 GIMD1P0DJR0 217 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 TFE3P19532 575 aaPredicted RBP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 PON1P27169 355 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 OR1E1P30953 314 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 SULT1E1P49888 294 aa15.96■□□□□ 0.15
LINC01116-202ENST00000339037 PCBP4P57723 403 aaKnown RBP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 RNASE9P60153 205 aaKnown RBP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 HNRNPKP61978 463 aaKnown RBP eCLIP15.96■□□□□ 0.15
LINC01116-202ENST00000339037 CXADRP78310 365 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms