RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GLIS2Q9BZE0 524 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 C6orf62Q9GZU0 229 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 AAASQ9NRG9 546 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 TRMT6Q9UJA5 497 aaKnown RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 LACTBL1A8MY62 500 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 HMGCRP04035 888 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 CYP1A2P05177 515 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 KRT6CP48668 564 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 RPL7AP62424 266 aaKnown RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 DNASE1L3Q13609 305 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ANKDD1AQ495B1 522 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 PPP2R2DQ66LE6 453 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 C11orf74Q86VG3 221 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 REPS2Q8NFH8 660 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 IL31RAQ8NI17 732 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ADAM32Q8TC27 787 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 OLFM1Q99784 485 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ITGA11Q9UKX5 1188 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 HEATR9A2RTY3 570 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 NCF1BA6NI72 391 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 NCF1CA8MVU1 366 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 SLCO1B7G3V0H7 640 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 PRRG1O14668 218 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 VILLO15195 856 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 NCF1P14598 390 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 AKAP5P24588 427 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 NKX2-5P52952 324 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 GTF2H3Q13889 308 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 CCDC85BQ15834 202 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 C15orf59Q2T9L4 293 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 FAM117BQ6P1L5 589 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 DEFB132Q7Z7B7 95 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ATP6V0D2Q8N8Y2 350 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 MAGEE2Q8TD90 523 aaPredicted RBP16.28■□□□□ 0.2
NPHP3-201ENST00000337331 HASPINQ8TF76 798 aa16.28■□□□□ 0.2
NPHP3-201ENST00000337331 ADAMTSL3P82987 1691 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 EVPLLA8MZ36 301 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 DNAJA2O60884 412 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 KCNH1O95259 989 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 ATP5BP06576 529 aaKnown RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 ZNF182P17025 639 aaPredicted RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 ZIK1Q3SY52 487 aaPredicted RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 ZC3H12BQ5HYM0 836 aaKnown RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 NEK5Q6P3R8 708 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 KYAT3Q6YP21 454 aaKnown RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 IQCF2Q8IXL9 164 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 PHF21BQ96EK2 531 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 C17orf102A2RUQ5 167 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 RNF103O00237 685 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 CCNT2O60583 730 aaKnown RBP16.27■□□□□ 0.2
NPHP3-201ENST00000337331 THP07101 528 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 FASP25445 335 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 CPT1AP50416 773 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 CAMK1DQ8IU85 385 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 DEFB106AQ8N104 65 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 BANPQ8N9N5 519 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 APBB2Q92870 758 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 PORCNQ9H237 461 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 TMEM161AQ9NX61 479 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
NPHP3-201ENST00000337331 ATRNO75882 1429 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 DLDP09622 509 aaKnown RBP16.27■□□□□ 0.19
NPHP3-201ENST00000337331 HOXD10P28358 340 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 THPOP40225 353 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 ZNF157P51786 506 aaPredicted RBP16.27■□□□□ 0.19
NPHP3-201ENST00000337331 DGCR6Q14129 220 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 EML3Q32P44 896 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 GNPTGQ9UJJ9 305 aa16.27■□□□□ 0.19
NPHP3-201ENST00000337331 ZSCAN5BA6NJL1 495 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 SEC24AO95486 1093 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 FOXR2Q6PJQ5 311 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 OR7A2PQ8NGA2 310 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 EBF1Q9UH73 591 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 CRLS1Q9UJA2 301 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 A8MU76 341 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 H2AFYO75367 372 aaKnown RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TIPRLO75663 272 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 RBP1P09455 135 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ZACNQ401N2 412 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TDRPQ86YL5 185 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 P3H2Q8IVL5 708 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 SLC2A14Q8TDB8 520 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 LRRC15Q8TF66 581 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 RBBP8Q99708 897 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 CINPQ9BW66 212 aaPredicted RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TEX12Q9BXU0 123 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ATXN3LQ9H3M9 355 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 NT5MQ9NPB1 228 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 IPPQ9Y573 584 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 KAT6AQ92794 2004 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 NCAM2O15394 837 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 FBXO21O94952 628 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 NADKO95544 446 aaPredicted RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 HLA-DPA1P20036 260 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 RPL22P35268 128 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms